Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC16.91■□□□□ 0.3
VGLL1Q99990 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL1Q99990 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
VGLL1Q99990 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL1Q99990 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VGLL1Q99990 LINC00526-201ENST00000581067 1875 ntBASIC16.9■□□□□ 0.3
VGLL1Q99990 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL1Q99990 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL1Q99990 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL1Q99990 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL1Q99990 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL1Q99990 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
VGLL1Q99990 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.9■□□□□ 0.3
VGLL1Q99990 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL1Q99990 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.9■□□□□ 0.3
VGLL1Q99990 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL1Q99990 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.9■□□□□ 0.3
VGLL1Q99990 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
VGLL1Q99990 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC16.89■□□□□ 0.3
VGLL1Q99990 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
VGLL1Q99990 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
VGLL1Q99990 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL1Q99990 AC120024.1-201ENST00000562672 995 ntBASIC16.89■□□□□ 0.29
VGLL1Q99990 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL1Q99990 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL1Q99990 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.89■□□□□ 0.29
VGLL1Q99990 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL1Q99990 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL1Q99990 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL1Q99990 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL1Q99990 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL1Q99990 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
VGLL1Q99990 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL1Q99990 AC079630.1-202ENST00000618127 1840 ntBASIC16.89■□□□□ 0.29
VGLL1Q99990 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
VGLL1Q99990 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL1Q99990 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC16.88■□□□□ 0.29
VGLL1Q99990 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.88■□□□□ 0.29
VGLL1Q99990 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
VGLL1Q99990 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL1Q99990 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL1Q99990 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL1Q99990 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VGLL1Q99990 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL1Q99990 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL1Q99990 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
VGLL1Q99990 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL1Q99990 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
VGLL1Q99990 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
VGLL1Q99990 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VGLL1Q99990 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VGLL1Q99990 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.87■□□□□ 0.29
VGLL1Q99990 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VGLL1Q99990 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VGLL1Q99990 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
VGLL1Q99990 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC16.87■□□□□ 0.29
VGLL1Q99990 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.87■□□□□ 0.29
VGLL1Q99990 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC16.87■□□□□ 0.29
VGLL1Q99990 ABHD17AP5-201ENST00000580133 923 ntBASIC16.87■□□□□ 0.29
VGLL1Q99990 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.87■□□□□ 0.29
VGLL1Q99990 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VGLL1Q99990 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
VGLL1Q99990 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VGLL1Q99990 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
VGLL1Q99990 ECEL1P1-201ENST00000373592 1742 ntBASIC16.87■□□□□ 0.29
VGLL1Q99990 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC16.87■□□□□ 0.29
VGLL1Q99990 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.87■□□□□ 0.29
VGLL1Q99990 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
VGLL1Q99990 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VGLL1Q99990 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VGLL1Q99990 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
VGLL1Q99990 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VGLL1Q99990 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VGLL1Q99990 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VGLL1Q99990 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC16.86■□□□□ 0.29
VGLL1Q99990 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VGLL1Q99990 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VGLL1Q99990 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VGLL1Q99990 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC16.86■□□□□ 0.29
VGLL1Q99990 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
VGLL1Q99990 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VGLL1Q99990 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC16.86■□□□□ 0.29
VGLL1Q99990 BHLHE23-202ENST00000612929 1109 ntBASIC16.86■□□□□ 0.29
VGLL1Q99990 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VGLL1Q99990 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VGLL1Q99990 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
VGLL1Q99990 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
VGLL1Q99990 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC16.86■□□□□ 0.29
VGLL1Q99990 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC16.85■□□□□ 0.29
VGLL1Q99990 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
VGLL1Q99990 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VGLL1Q99990 AF131216.4-201ENST00000638924 1588 ntBASIC16.85■□□□□ 0.29
VGLL1Q99990 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC16.85■□□□□ 0.29
VGLL1Q99990 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
VGLL1Q99990 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC16.85■□□□□ 0.29
VGLL1Q99990 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
VGLL1Q99990 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VGLL1Q99990 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.85■□□□□ 0.29
VGLL1Q99990 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VGLL1Q99990 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms