Protein–RNA interactions for Protein: Q96RJ6

FERD3L, Fer3-like protein, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FERD3LQ96RJ6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.84■■□□□ 1.09
FERD3LQ96RJ6 DUX4L19-201ENST00000557448 1267 ntBASIC21.84■■□□□ 1.09
FERD3LQ96RJ6 AC009086.3-201ENST00000623486 1008 ntBASIC21.84■■□□□ 1.09
FERD3LQ96RJ6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
FERD3LQ96RJ6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
FERD3LQ96RJ6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FERD3LQ96RJ6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FERD3LQ96RJ6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
FERD3LQ96RJ6 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
FERD3LQ96RJ6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
FERD3LQ96RJ6 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
FERD3LQ96RJ6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
FERD3LQ96RJ6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
FERD3LQ96RJ6 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.83■■□□□ 1.09
FERD3LQ96RJ6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
FERD3LQ96RJ6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
FERD3LQ96RJ6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
FERD3LQ96RJ6 AC144652.1-201ENST00000609974 1624 ntBASIC21.83■■□□□ 1.08
FERD3LQ96RJ6 SYT6-210ENST00000641643 1587 ntBASIC21.82■■□□□ 1.08
FERD3LQ96RJ6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
FERD3LQ96RJ6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
FERD3LQ96RJ6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FERD3LQ96RJ6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
FERD3LQ96RJ6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
FERD3LQ96RJ6 FP325331.1-202ENST00000623531 1380 ntBASIC21.82■■□□□ 1.08
FERD3LQ96RJ6 AC079630.1-202ENST00000618127 1840 ntBASIC21.82■■□□□ 1.08
FERD3LQ96RJ6 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
FERD3LQ96RJ6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.82■■□□□ 1.08
FERD3LQ96RJ6 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
FERD3LQ96RJ6 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.82■■□□□ 1.08
FERD3LQ96RJ6 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
FERD3LQ96RJ6 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
FERD3LQ96RJ6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.81■■□□□ 1.08
FERD3LQ96RJ6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
FERD3LQ96RJ6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.81■■□□□ 1.08
FERD3LQ96RJ6 AC006455.2-201ENST00000429931 906 ntBASIC21.81■■□□□ 1.08
FERD3LQ96RJ6 AL139246.5-201ENST00000606645 996 ntBASIC21.81■■□□□ 1.08
FERD3LQ96RJ6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FERD3LQ96RJ6 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
FERD3LQ96RJ6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
FERD3LQ96RJ6 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
FERD3LQ96RJ6 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.8■■□□□ 1.08
FERD3LQ96RJ6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FERD3LQ96RJ6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
FERD3LQ96RJ6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
FERD3LQ96RJ6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.8■■□□□ 1.08
FERD3LQ96RJ6 AC110285.6-201ENST00000617652 491 ntBASIC21.8■■□□□ 1.08
FERD3LQ96RJ6 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FERD3LQ96RJ6 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FERD3LQ96RJ6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.79■■□□□ 1.08
FERD3LQ96RJ6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FERD3LQ96RJ6 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
FERD3LQ96RJ6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
FERD3LQ96RJ6 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
FERD3LQ96RJ6 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.79■■□□□ 1.08
FERD3LQ96RJ6 PBX2P1-201ENST00000493219 1291 ntBASIC21.79■■□□□ 1.08
FERD3LQ96RJ6 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
FERD3LQ96RJ6 AL136162.1-201ENST00000607711 1078 ntBASIC21.79■■□□□ 1.08
FERD3LQ96RJ6 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
FERD3LQ96RJ6 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FERD3LQ96RJ6 LINC01529-204ENST00000636474 1715 ntBASIC21.78■■□□□ 1.08
FERD3LQ96RJ6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.78■■□□□ 1.08
FERD3LQ96RJ6 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FERD3LQ96RJ6 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
FERD3LQ96RJ6 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.78■■□□□ 1.08
FERD3LQ96RJ6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.78■■□□□ 1.08
FERD3LQ96RJ6 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
FERD3LQ96RJ6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
FERD3LQ96RJ6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
FERD3LQ96RJ6 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FERD3LQ96RJ6 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FERD3LQ96RJ6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
FERD3LQ96RJ6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
FERD3LQ96RJ6 SERBP1P1-201ENST00000396021 1160 ntBASIC21.77■■□□□ 1.08
FERD3LQ96RJ6 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.77■■□□□ 1.08
FERD3LQ96RJ6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.77■■□□□ 1.08
FERD3LQ96RJ6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.77■■□□□ 1.08
FERD3LQ96RJ6 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
FERD3LQ96RJ6 pRNA.6-201ENST00000610482 90 ntBASIC21.77■■□□□ 1.08
FERD3LQ96RJ6 pRNA.5-201ENST00000612139 90 ntBASIC21.77■■□□□ 1.08
FERD3LQ96RJ6 pRNA.11-201ENST00000618423 90 ntBASIC21.77■■□□□ 1.08
FERD3LQ96RJ6 pRNA.13-201ENST00000619112 90 ntBASIC21.77■■□□□ 1.08
FERD3LQ96RJ6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
FERD3LQ96RJ6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
FERD3LQ96RJ6 ANOS2P-203ENST00000472227 1816 ntBASIC21.76■■□□□ 1.07
FERD3LQ96RJ6 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC21.76■■□□□ 1.07
FERD3LQ96RJ6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
FERD3LQ96RJ6 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
FERD3LQ96RJ6 DUX4L4-201ENST00000566884 1269 ntBASIC21.76■■□□□ 1.07
FERD3LQ96RJ6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.76■■□□□ 1.07
FERD3LQ96RJ6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.76■■□□□ 1.07
FERD3LQ96RJ6 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.76■■□□□ 1.07
FERD3LQ96RJ6 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FERD3LQ96RJ6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FERD3LQ96RJ6 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FERD3LQ96RJ6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
FERD3LQ96RJ6 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
FERD3LQ96RJ6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.76■■□□□ 1.07
FERD3LQ96RJ6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.75■■□□□ 1.07
FERD3LQ96RJ6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 278 ms