Protein–RNA interactions for Protein: Q96QR1

SCGB3A1, Secretoglobin family 3A member 1, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1Q96QR1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SCGB3A1Q96QR1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.99■□□□□ 0.15
SCGB3A1Q96QR1 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.99■□□□□ 0.15
SCGB3A1Q96QR1 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCGB3A1Q96QR1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCGB3A1Q96QR1 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SCGB3A1Q96QR1 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCGB3A1Q96QR1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCGB3A1Q96QR1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCGB3A1Q96QR1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.98■□□□□ 0.15
SCGB3A1Q96QR1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCGB3A1Q96QR1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC15.98■□□□□ 0.15
SCGB3A1Q96QR1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCGB3A1Q96QR1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCGB3A1Q96QR1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCGB3A1Q96QR1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
SCGB3A1Q96QR1 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCGB3A1Q96QR1 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCGB3A1Q96QR1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCGB3A1Q96QR1 SLC25A24-204ENST00000569674 2357 ntBASIC15.98■□□□□ 0.15
SCGB3A1Q96QR1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
SCGB3A1Q96QR1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
SCGB3A1Q96QR1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCGB3A1Q96QR1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCGB3A1Q96QR1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC15.97■□□□□ 0.15
SCGB3A1Q96QR1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
SCGB3A1Q96QR1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCGB3A1Q96QR1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SCGB3A1Q96QR1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCGB3A1Q96QR1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
SCGB3A1Q96QR1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCGB3A1Q96QR1 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC15.97■□□□□ 0.15
SCGB3A1Q96QR1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCGB3A1Q96QR1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
SCGB3A1Q96QR1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCGB3A1Q96QR1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC15.97■□□□□ 0.15
SCGB3A1Q96QR1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SCGB3A1Q96QR1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCGB3A1Q96QR1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SCGB3A1Q96QR1 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCGB3A1Q96QR1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SCGB3A1Q96QR1 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCGB3A1Q96QR1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SCGB3A1Q96QR1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SCGB3A1Q96QR1 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.96■□□□□ 0.15
SCGB3A1Q96QR1 DUX4L11-201ENST00000611504 1267 ntBASIC15.96■□□□□ 0.15
SCGB3A1Q96QR1 DUX4L12-201ENST00000614593 1267 ntBASIC15.96■□□□□ 0.15
SCGB3A1Q96QR1 DUX4L14-201ENST00000621227 1267 ntBASIC15.96■□□□□ 0.15
SCGB3A1Q96QR1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC15.96■□□□□ 0.15
SCGB3A1Q96QR1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SCGB3A1Q96QR1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC15.96■□□□□ 0.14
SCGB3A1Q96QR1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 AL161729.1-201ENST00000604104 1402 ntBASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.95■□□□□ 0.14
SCGB3A1Q96QR1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
SCGB3A1Q96QR1 AC025884.2-201ENST00000553429 711 ntBASIC15.94■□□□□ 0.14
SCGB3A1Q96QR1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCGB3A1Q96QR1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCGB3A1Q96QR1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCGB3A1Q96QR1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC15.94■□□□□ 0.14
SCGB3A1Q96QR1 H19-210ENST00000439725 1929 ntTSL 2 BASIC15.94■□□□□ 0.14
SCGB3A1Q96QR1 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC15.94■□□□□ 0.14
SCGB3A1Q96QR1 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SCGB3A1Q96QR1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 C11orf96-202ENST00000528572 1834 ntBASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC15.93■□□□□ 0.14
SCGB3A1Q96QR1 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SCGB3A1Q96QR1 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms