Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC16.83■□□□□ 0.28
AP1S3Q96PC3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S3Q96PC3 KRT18P10-201ENST00000388836 1287 ntBASIC16.83■□□□□ 0.28
AP1S3Q96PC3 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S3Q96PC3 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S3Q96PC3 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S3Q96PC3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S3Q96PC3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S3Q96PC3 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.83■□□□□ 0.28
AP1S3Q96PC3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S3Q96PC3 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.83■□□□□ 0.28
AP1S3Q96PC3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S3Q96PC3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S3Q96PC3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
AP1S3Q96PC3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S3Q96PC3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC16.82■□□□□ 0.28
AP1S3Q96PC3 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S3Q96PC3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC16.82■□□□□ 0.28
AP1S3Q96PC3 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.82■□□□□ 0.28
AP1S3Q96PC3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC16.82■□□□□ 0.28
AP1S3Q96PC3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
AP1S3Q96PC3 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S3Q96PC3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S3Q96PC3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S3Q96PC3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S3Q96PC3 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.82■□□□□ 0.28
AP1S3Q96PC3 AL117328.2-201ENST00000624617 1940 ntBASIC16.82■□□□□ 0.28
AP1S3Q96PC3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S3Q96PC3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC16.82■□□□□ 0.28
AP1S3Q96PC3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
AP1S3Q96PC3 C9orf163-202ENST00000624034 2573 ntBASIC16.82■□□□□ 0.28
AP1S3Q96PC3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S3Q96PC3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
AP1S3Q96PC3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S3Q96PC3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
AP1S3Q96PC3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S3Q96PC3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S3Q96PC3 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S3Q96PC3 FOXO3B-201ENST00000395675 1928 ntBASIC16.81■□□□□ 0.28
AP1S3Q96PC3 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AP1S3Q96PC3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
AP1S3Q96PC3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S3Q96PC3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S3Q96PC3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
AP1S3Q96PC3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
AP1S3Q96PC3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC16.8■□□□□ 0.28
AP1S3Q96PC3 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S3Q96PC3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S3Q96PC3 RP9P-202ENST00000450133 1212 ntBASIC16.8■□□□□ 0.28
AP1S3Q96PC3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S3Q96PC3 AC016575.1-201ENST00000607026 382 ntBASIC16.8■□□□□ 0.28
AP1S3Q96PC3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
AP1S3Q96PC3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
AP1S3Q96PC3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
AP1S3Q96PC3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
AP1S3Q96PC3 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
AP1S3Q96PC3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S3Q96PC3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S3Q96PC3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S3Q96PC3 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC16.79■□□□□ 0.28
AP1S3Q96PC3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S3Q96PC3 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S3Q96PC3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.79■□□□□ 0.28
AP1S3Q96PC3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC16.79■□□□□ 0.28
AP1S3Q96PC3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC16.79■□□□□ 0.28
AP1S3Q96PC3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
AP1S3Q96PC3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S3Q96PC3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S3Q96PC3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S3Q96PC3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
AP1S3Q96PC3 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 AC092296.2-201ENST00000589470 999 ntBASIC16.78■□□□□ 0.28
AP1S3Q96PC3 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC16.78■□□□□ 0.28
AP1S3Q96PC3 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S3Q96PC3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
AP1S3Q96PC3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S3Q96PC3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S3Q96PC3 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
AP1S3Q96PC3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S3Q96PC3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
AP1S3Q96PC3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
AP1S3Q96PC3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms