Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TIMD4Q96H15 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.82■□□□□ 0.6
TIMD4Q96H15 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TIMD4Q96H15 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TIMD4Q96H15 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.82■□□□□ 0.6
TIMD4Q96H15 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TIMD4Q96H15 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TIMD4Q96H15 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TIMD4Q96H15 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.81■□□□□ 0.6
TIMD4Q96H15 FP325331.1-202ENST00000623531 1380 ntBASIC18.81■□□□□ 0.6
TIMD4Q96H15 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMD4Q96H15 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMD4Q96H15 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TIMD4Q96H15 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.81■□□□□ 0.6
TIMD4Q96H15 AC006455.2-201ENST00000429931 906 ntBASIC18.81■□□□□ 0.6
TIMD4Q96H15 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.81■□□□□ 0.6
TIMD4Q96H15 pRNA.6-201ENST00000610482 90 ntBASIC18.81■□□□□ 0.6
TIMD4Q96H15 pRNA.5-201ENST00000612139 90 ntBASIC18.81■□□□□ 0.6
TIMD4Q96H15 pRNA.11-201ENST00000618423 90 ntBASIC18.81■□□□□ 0.6
TIMD4Q96H15 pRNA.13-201ENST00000619112 90 ntBASIC18.81■□□□□ 0.6
TIMD4Q96H15 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
TIMD4Q96H15 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TIMD4Q96H15 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.81■□□□□ 0.6
TIMD4Q96H15 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.81■□□□□ 0.6
TIMD4Q96H15 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TIMD4Q96H15 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TIMD4Q96H15 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMD4Q96H15 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TIMD4Q96H15 AC027682.1-201ENST00000562846 899 ntBASIC18.8■□□□□ 0.6
TIMD4Q96H15 AF213884.3-201ENST00000563833 479 ntBASIC18.8■□□□□ 0.6
TIMD4Q96H15 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.8■□□□□ 0.6
TIMD4Q96H15 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TIMD4Q96H15 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
TIMD4Q96H15 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMD4Q96H15 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMD4Q96H15 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
TIMD4Q96H15 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TIMD4Q96H15 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMD4Q96H15 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
TIMD4Q96H15 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TIMD4Q96H15 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TIMD4Q96H15 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TIMD4Q96H15 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMD4Q96H15 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMD4Q96H15 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TIMD4Q96H15 AC091305.1-201ENST00000479476 895 ntBASIC18.79■□□□□ 0.6
TIMD4Q96H15 SUDS3P1-201ENST00000505831 966 ntBASIC18.79■□□□□ 0.6
TIMD4Q96H15 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.79■□□□□ 0.6
TIMD4Q96H15 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.79■□□□□ 0.6
TIMD4Q96H15 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
TIMD4Q96H15 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMD4Q96H15 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.79■□□□□ 0.6
TIMD4Q96H15 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TIMD4Q96H15 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC18.79■□□□□ 0.6
TIMD4Q96H15 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.78■□□□□ 0.6
TIMD4Q96H15 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TIMD4Q96H15 HYI-206ENST00000372434 1025 ntTSL 5 BASIC18.77■□□□□ 0.6
TIMD4Q96H15 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.77■□□□□ 0.6
TIMD4Q96H15 AP001330.3-201ENST00000520123 633 ntBASIC18.77■□□□□ 0.6
TIMD4Q96H15 AL031432.3-201ENST00000607698 485 ntBASIC18.77■□□□□ 0.6
TIMD4Q96H15 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TIMD4Q96H15 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TIMD4Q96H15 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TIMD4Q96H15 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
TIMD4Q96H15 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
TIMD4Q96H15 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.76■□□□□ 0.59
TIMD4Q96H15 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TIMD4Q96H15 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TIMD4Q96H15 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMD4Q96H15 AC144652.1-201ENST00000609974 1624 ntBASIC18.76■□□□□ 0.59
TIMD4Q96H15 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMD4Q96H15 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TIMD4Q96H15 MIR939-201ENST00000401314 82 ntBASIC18.76■□□□□ 0.59
TIMD4Q96H15 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.76■□□□□ 0.59
TIMD4Q96H15 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TIMD4Q96H15 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.76■□□□□ 0.59
TIMD4Q96H15 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.76■□□□□ 0.59
TIMD4Q96H15 LINC01529-204ENST00000636474 1715 ntBASIC18.76■□□□□ 0.59
TIMD4Q96H15 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.76■□□□□ 0.59
TIMD4Q96H15 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
TIMD4Q96H15 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TIMD4Q96H15 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.76■□□□□ 0.59
TIMD4Q96H15 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TIMD4Q96H15 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TIMD4Q96H15 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TIMD4Q96H15 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TIMD4Q96H15 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TIMD4Q96H15 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TIMD4Q96H15 MIR935-201ENST00000401179 91 ntBASIC18.75■□□□□ 0.59
TIMD4Q96H15 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.75■□□□□ 0.59
TIMD4Q96H15 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
TIMD4Q96H15 AC008764.7-201ENST00000593779 1081 ntBASIC18.75■□□□□ 0.59
TIMD4Q96H15 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.75■□□□□ 0.59
TIMD4Q96H15 AL136967.2-201ENST00000623968 743 ntBASIC18.75■□□□□ 0.59
TIMD4Q96H15 RASA4CP-201ENST00000424092 1398 ntBASIC18.75■□□□□ 0.59
TIMD4Q96H15 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
TIMD4Q96H15 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TIMD4Q96H15 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TIMD4Q96H15 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TIMD4Q96H15 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms