Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.35■□□□□ 0.69
CPNE2Q96FN4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.35■□□□□ 0.69
CPNE2Q96FN4 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE2Q96FN4 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CPNE2Q96FN4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.35■□□□□ 0.69
CPNE2Q96FN4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE2Q96FN4 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CPNE2Q96FN4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE2Q96FN4 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE2Q96FN4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.34■□□□□ 0.69
CPNE2Q96FN4 ATP5G2P3-201ENST00000429083 425 ntBASIC19.34■□□□□ 0.69
CPNE2Q96FN4 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.34■□□□□ 0.69
CPNE2Q96FN4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.34■□□□□ 0.69
CPNE2Q96FN4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE2Q96FN4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE2Q96FN4 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE2Q96FN4 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CPNE2Q96FN4 AL117328.2-201ENST00000624617 1940 ntBASIC19.33■□□□□ 0.69
CPNE2Q96FN4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE2Q96FN4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CPNE2Q96FN4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CPNE2Q96FN4 C9orf163-202ENST00000624034 2573 ntBASIC19.33■□□□□ 0.69
CPNE2Q96FN4 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE2Q96FN4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE2Q96FN4 TSPY13P-201ENST00000338964 914 ntBASIC19.33■□□□□ 0.68
CPNE2Q96FN4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE2Q96FN4 AC004448.1-201ENST00000458332 883 ntBASIC19.33■□□□□ 0.68
CPNE2Q96FN4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE2Q96FN4 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
CPNE2Q96FN4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.33■□□□□ 0.68
CPNE2Q96FN4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CPNE2Q96FN4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CPNE2Q96FN4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CPNE2Q96FN4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE2Q96FN4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CPNE2Q96FN4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE2Q96FN4 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.32■□□□□ 0.68
CPNE2Q96FN4 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE2Q96FN4 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CPNE2Q96FN4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPNE2Q96FN4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.3■□□□□ 0.68
CPNE2Q96FN4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CPNE2Q96FN4 AC233723.2-201ENST00000623798 2106 ntBASIC19.3■□□□□ 0.68
CPNE2Q96FN4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CPNE2Q96FN4 AC004987.1-201ENST00000428627 508 ntBASIC19.3■□□□□ 0.68
CPNE2Q96FN4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC19.3■□□□□ 0.68
CPNE2Q96FN4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE2Q96FN4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPNE2Q96FN4 AF131216.4-201ENST00000638924 1588 ntBASIC19.3■□□□□ 0.68
CPNE2Q96FN4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE2Q96FN4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE2Q96FN4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.29■□□□□ 0.68
CPNE2Q96FN4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.29■□□□□ 0.68
CPNE2Q96FN4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CPNE2Q96FN4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE2Q96FN4 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.29■□□□□ 0.68
CPNE2Q96FN4 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.29■□□□□ 0.68
CPNE2Q96FN4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE2Q96FN4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE2Q96FN4 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.29■□□□□ 0.68
CPNE2Q96FN4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPNE2Q96FN4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CPNE2Q96FN4 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CPNE2Q96FN4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.29■□□□□ 0.68
CPNE2Q96FN4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE2Q96FN4 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE2Q96FN4 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.28■□□□□ 0.68
CPNE2Q96FN4 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE2Q96FN4 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.28■□□□□ 0.68
CPNE2Q96FN4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE2Q96FN4 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CPNE2Q96FN4 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.28■□□□□ 0.68
CPNE2Q96FN4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CPNE2Q96FN4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE2Q96FN4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CPNE2Q96FN4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CPNE2Q96FN4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
CPNE2Q96FN4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE2Q96FN4 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CPNE2Q96FN4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms