Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
TRIM11Q96F44 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM11Q96F44 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC23.68■■□□□ 1.38
TRIM11Q96F44 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM11Q96F44 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.68■■□□□ 1.38
TRIM11Q96F44 RARRES2P1-201ENST00000474487 481 ntBASIC23.68■■□□□ 1.38
TRIM11Q96F44 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TRIM11Q96F44 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.68■■□□□ 1.38
TRIM11Q96F44 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM11Q96F44 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.67■■□□□ 1.38
TRIM11Q96F44 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC23.67■■□□□ 1.38
TRIM11Q96F44 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.67■■□□□ 1.38
TRIM11Q96F44 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.67■■□□□ 1.38
TRIM11Q96F44 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRIM11Q96F44 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM11Q96F44 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.66■■□□□ 1.38
TRIM11Q96F44 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM11Q96F44 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM11Q96F44 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
TRIM11Q96F44 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
TRIM11Q96F44 C1orf229-201ENST00000623686 2258 ntBASIC23.66■■□□□ 1.38
TRIM11Q96F44 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM11Q96F44 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM11Q96F44 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM11Q96F44 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM11Q96F44 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM11Q96F44 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
TRIM11Q96F44 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.65■■□□□ 1.38
TRIM11Q96F44 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM11Q96F44 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM11Q96F44 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM11Q96F44 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM11Q96F44 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC23.65■■□□□ 1.38
TRIM11Q96F44 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM11Q96F44 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM11Q96F44 AC233723.2-201ENST00000623798 2106 ntBASIC23.65■■□□□ 1.38
TRIM11Q96F44 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM11Q96F44 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TRIM11Q96F44 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
TRIM11Q96F44 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.64■■□□□ 1.38
TRIM11Q96F44 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
TRIM11Q96F44 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.64■■□□□ 1.38
TRIM11Q96F44 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
TRIM11Q96F44 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.64■■□□□ 1.37
TRIM11Q96F44 MTDHP2-201ENST00000601468 714 ntBASIC23.64■■□□□ 1.37
TRIM11Q96F44 MIR4787-201ENST00000607364 84 ntBASIC23.64■■□□□ 1.37
TRIM11Q96F44 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM11Q96F44 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
TRIM11Q96F44 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC23.64■■□□□ 1.37
TRIM11Q96F44 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC23.64■■□□□ 1.37
TRIM11Q96F44 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM11Q96F44 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
TRIM11Q96F44 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC23.64■■□□□ 1.37
TRIM11Q96F44 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM11Q96F44 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM11Q96F44 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
TRIM11Q96F44 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
TRIM11Q96F44 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM11Q96F44 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
TRIM11Q96F44 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
TRIM11Q96F44 AL117328.2-201ENST00000624617 1940 ntBASIC23.63■■□□□ 1.37
TRIM11Q96F44 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM11Q96F44 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
TRIM11Q96F44 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.62■■□□□ 1.37
TRIM11Q96F44 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.62■■□□□ 1.37
TRIM11Q96F44 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM11Q96F44 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.62■■□□□ 1.37
TRIM11Q96F44 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TRIM11Q96F44 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM11Q96F44 AC079834.2-201ENST00000609776 1949 ntBASIC23.62■■□□□ 1.37
TRIM11Q96F44 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC23.62■■□□□ 1.37
TRIM11Q96F44 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TRIM11Q96F44 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
TRIM11Q96F44 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM11Q96F44 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM11Q96F44 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TRIM11Q96F44 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.61■■□□□ 1.37
TRIM11Q96F44 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
TRIM11Q96F44 FP325331.1-202ENST00000623531 1380 ntBASIC23.61■■□□□ 1.37
TRIM11Q96F44 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM11Q96F44 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.6■■□□□ 1.37
TRIM11Q96F44 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.6■■□□□ 1.37
TRIM11Q96F44 ESRRAP2-201ENST00000418437 1549 ntBASIC23.6■■□□□ 1.37
TRIM11Q96F44 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
TRIM11Q96F44 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM11Q96F44 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM11Q96F44 AC009299.2-201ENST00000482477 511 ntBASIC23.6■■□□□ 1.37
TRIM11Q96F44 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM11Q96F44 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.6■■□□□ 1.37
TRIM11Q96F44 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TRIM11Q96F44 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM11Q96F44 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM11Q96F44 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM11Q96F44 AC239859.2-201ENST00000444165 318 ntBASIC23.59■■□□□ 1.37
TRIM11Q96F44 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.59■■□□□ 1.37
TRIM11Q96F44 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.59■■□□□ 1.37
TRIM11Q96F44 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM11Q96F44 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
TRIM11Q96F44 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC23.59■■□□□ 1.37
TRIM11Q96F44 LINC01529-204ENST00000636474 1715 ntBASIC23.59■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms