Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 AL353803.4-201ENST00000565882 1934 ntBASIC21.84■■□□□ 1.09
RHBDF1Q96CC6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RHBDF1Q96CC6 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RHBDF1Q96CC6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.84■■□□□ 1.09
RHBDF1Q96CC6 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
RHBDF1Q96CC6 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RHBDF1Q96CC6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.84■■□□□ 1.09
RHBDF1Q96CC6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RHBDF1Q96CC6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.84■■□□□ 1.09
RHBDF1Q96CC6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RHBDF1Q96CC6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RHBDF1Q96CC6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RHBDF1Q96CC6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
RHBDF1Q96CC6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.84■■□□□ 1.09
RHBDF1Q96CC6 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RHBDF1Q96CC6 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.83■■□□□ 1.09
RHBDF1Q96CC6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RHBDF1Q96CC6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RHBDF1Q96CC6 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RHBDF1Q96CC6 TSPY9P-201ENST00000440215 945 ntBASIC21.83■■□□□ 1.09
RHBDF1Q96CC6 TSPY11P-201ENST00000442607 1045 ntBASIC21.83■■□□□ 1.09
RHBDF1Q96CC6 AC010997.5-201ENST00000609182 354 ntBASIC21.83■■□□□ 1.09
RHBDF1Q96CC6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.08
RHBDF1Q96CC6 AC144652.1-201ENST00000609974 1624 ntBASIC21.83■■□□□ 1.08
RHBDF1Q96CC6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RHBDF1Q96CC6 AC079834.2-201ENST00000609776 1949 ntBASIC21.82■■□□□ 1.08
RHBDF1Q96CC6 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RHBDF1Q96CC6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RHBDF1Q96CC6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RHBDF1Q96CC6 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.82■■□□□ 1.08
RHBDF1Q96CC6 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.82■■□□□ 1.08
RHBDF1Q96CC6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RHBDF1Q96CC6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RHBDF1Q96CC6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC21.81■■□□□ 1.08
RHBDF1Q96CC6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.81■■□□□ 1.08
RHBDF1Q96CC6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RHBDF1Q96CC6 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.81■■□□□ 1.08
RHBDF1Q96CC6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RHBDF1Q96CC6 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
RHBDF1Q96CC6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.81■■□□□ 1.08
RHBDF1Q96CC6 AL035685.1-201ENST00000636663 812 ntBASIC21.81■■□□□ 1.08
RHBDF1Q96CC6 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RHBDF1Q96CC6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
RHBDF1Q96CC6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RHBDF1Q96CC6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.8■■□□□ 1.08
RHBDF1Q96CC6 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.8■■□□□ 1.08
RHBDF1Q96CC6 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.8■■□□□ 1.08
RHBDF1Q96CC6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RHBDF1Q96CC6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RHBDF1Q96CC6 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.8■■□□□ 1.08
RHBDF1Q96CC6 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RHBDF1Q96CC6 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RHBDF1Q96CC6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.8■■□□□ 1.08
RHBDF1Q96CC6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RHBDF1Q96CC6 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
RHBDF1Q96CC6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
RHBDF1Q96CC6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
RHBDF1Q96CC6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
RHBDF1Q96CC6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RHBDF1Q96CC6 UNC93B8-201ENST00000511903 705 ntBASIC21.79■■□□□ 1.08
RHBDF1Q96CC6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.79■■□□□ 1.08
RHBDF1Q96CC6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
RHBDF1Q96CC6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RHBDF1Q96CC6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.79■■□□□ 1.08
RHBDF1Q96CC6 C1orf229-201ENST00000623686 2258 ntBASIC21.78■■□□□ 1.08
RHBDF1Q96CC6 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.78■■□□□ 1.08
RHBDF1Q96CC6 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
RHBDF1Q96CC6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.78■■□□□ 1.08
RHBDF1Q96CC6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RHBDF1Q96CC6 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.78■■□□□ 1.08
RHBDF1Q96CC6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RHBDF1Q96CC6 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RHBDF1Q96CC6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
RHBDF1Q96CC6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RHBDF1Q96CC6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RHBDF1Q96CC6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.77■■□□□ 1.08
RHBDF1Q96CC6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.77■■□□□ 1.08
RHBDF1Q96CC6 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.77■■□□□ 1.08
RHBDF1Q96CC6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.77■■□□□ 1.08
RHBDF1Q96CC6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.77■■□□□ 1.08
RHBDF1Q96CC6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
RHBDF1Q96CC6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.77■■□□□ 1.07
RHBDF1Q96CC6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RHBDF1Q96CC6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RHBDF1Q96CC6 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RHBDF1Q96CC6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RHBDF1Q96CC6 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
RHBDF1Q96CC6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
RHBDF1Q96CC6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RHBDF1Q96CC6 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RHBDF1Q96CC6 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RHBDF1Q96CC6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
RHBDF1Q96CC6 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.75■■□□□ 1.07
RHBDF1Q96CC6 AC009102.2-201ENST00000606772 1639 ntBASIC21.75■■□□□ 1.07
RHBDF1Q96CC6 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RHBDF1Q96CC6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDF1Q96CC6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
RHBDF1Q96CC6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDF1Q96CC6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RHBDF1Q96CC6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms