Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
RNF138Q8WVD3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
RNF138Q8WVD3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF138Q8WVD3 DUSP8P3-201ENST00000399571 1760 ntBASIC20.41■□□□□ 0.86
RNF138Q8WVD3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF138Q8WVD3 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF138Q8WVD3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF138Q8WVD3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
RNF138Q8WVD3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF138Q8WVD3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.41■□□□□ 0.86
RNF138Q8WVD3 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF138Q8WVD3 AL353803.4-201ENST00000565882 1934 ntBASIC20.41■□□□□ 0.86
RNF138Q8WVD3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF138Q8WVD3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RNF138Q8WVD3 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF138Q8WVD3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
RNF138Q8WVD3 SERBP1P1-201ENST00000396021 1160 ntBASIC20.4■□□□□ 0.86
RNF138Q8WVD3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF138Q8WVD3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF138Q8WVD3 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RNF138Q8WVD3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.4■□□□□ 0.86
RNF138Q8WVD3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF138Q8WVD3 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RNF138Q8WVD3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.4■□□□□ 0.86
RNF138Q8WVD3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.4■□□□□ 0.86
RNF138Q8WVD3 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.39■□□□□ 0.86
RNF138Q8WVD3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.39■□□□□ 0.86
RNF138Q8WVD3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.39■□□□□ 0.86
RNF138Q8WVD3 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
RNF138Q8WVD3 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.39■□□□□ 0.85
RNF138Q8WVD3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RNF138Q8WVD3 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RNF138Q8WVD3 MIR3181-201ENST00000578512 73 ntBASIC20.39■□□□□ 0.85
RNF138Q8WVD3 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.39■□□□□ 0.85
RNF138Q8WVD3 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
RNF138Q8WVD3 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.39■□□□□ 0.85
RNF138Q8WVD3 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.39■□□□□ 0.85
RNF138Q8WVD3 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.85
RNF138Q8WVD3 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.38■□□□□ 0.85
RNF138Q8WVD3 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.38■□□□□ 0.85
RNF138Q8WVD3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF138Q8WVD3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
RNF138Q8WVD3 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF138Q8WVD3 AC110285.6-201ENST00000617652 491 ntBASIC20.38■□□□□ 0.85
RNF138Q8WVD3 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF138Q8WVD3 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF138Q8WVD3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
RNF138Q8WVD3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF138Q8WVD3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RNF138Q8WVD3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.38■□□□□ 0.85
RNF138Q8WVD3 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF138Q8WVD3 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF138Q8WVD3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF138Q8WVD3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF138Q8WVD3 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.37■□□□□ 0.85
RNF138Q8WVD3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF138Q8WVD3 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF138Q8WVD3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF138Q8WVD3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF138Q8WVD3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.37■□□□□ 0.85
RNF138Q8WVD3 AC011298.3-201ENST00000615796 283 ntBASIC20.37■□□□□ 0.85
RNF138Q8WVD3 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.37■□□□□ 0.85
RNF138Q8WVD3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF138Q8WVD3 SYT6-210ENST00000641643 1587 ntBASIC20.37■□□□□ 0.85
RNF138Q8WVD3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF138Q8WVD3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF138Q8WVD3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF138Q8WVD3 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RNF138Q8WVD3 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF138Q8WVD3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RNF138Q8WVD3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
RNF138Q8WVD3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF138Q8WVD3 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF138Q8WVD3 UNC93B3-201ENST00000308076 687 ntBASIC20.36■□□□□ 0.85
RNF138Q8WVD3 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
RNF138Q8WVD3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.36■□□□□ 0.85
RNF138Q8WVD3 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF138Q8WVD3 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
RNF138Q8WVD3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
RNF138Q8WVD3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF138Q8WVD3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RNF138Q8WVD3 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF138Q8WVD3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF138Q8WVD3 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF138Q8WVD3 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
RNF138Q8WVD3 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF138Q8WVD3 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
RNF138Q8WVD3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF138Q8WVD3 AC096631.2-201ENST00000436136 790 ntBASIC20.35■□□□□ 0.85
RNF138Q8WVD3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.35■□□□□ 0.85
RNF138Q8WVD3 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.35■□□□□ 0.85
RNF138Q8WVD3 pRNA.6-201ENST00000610482 90 ntBASIC20.35■□□□□ 0.85
RNF138Q8WVD3 pRNA.5-201ENST00000612139 90 ntBASIC20.35■□□□□ 0.85
RNF138Q8WVD3 pRNA.11-201ENST00000618423 90 ntBASIC20.35■□□□□ 0.85
RNF138Q8WVD3 pRNA.13-201ENST00000619112 90 ntBASIC20.35■□□□□ 0.85
RNF138Q8WVD3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF138Q8WVD3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF138Q8WVD3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
RNF138Q8WVD3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.35■□□□□ 0.85
RNF138Q8WVD3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms