Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
ZNF550Q7Z398 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
ZNF550Q7Z398 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF550Q7Z398 AC079630.1-202ENST00000618127 1840 ntBASIC20.6■□□□□ 0.89
ZNF550Q7Z398 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.6■□□□□ 0.89
ZNF550Q7Z398 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
ZNF550Q7Z398 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF550Q7Z398 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.6■□□□□ 0.89
ZNF550Q7Z398 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF550Q7Z398 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF550Q7Z398 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF550Q7Z398 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ZNF550Q7Z398 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.59■□□□□ 0.89
ZNF550Q7Z398 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF550Q7Z398 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ZNF550Q7Z398 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.59■□□□□ 0.89
ZNF550Q7Z398 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF550Q7Z398 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.59■□□□□ 0.89
ZNF550Q7Z398 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF550Q7Z398 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.58■□□□□ 0.89
ZNF550Q7Z398 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.58■□□□□ 0.89
ZNF550Q7Z398 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF550Q7Z398 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF550Q7Z398 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF550Q7Z398 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.58■□□□□ 0.89
ZNF550Q7Z398 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.58■□□□□ 0.89
ZNF550Q7Z398 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.58■□□□□ 0.88
ZNF550Q7Z398 AC133561.1-201ENST00000568600 2415 ntBASIC20.57■□□□□ 0.88
ZNF550Q7Z398 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF550Q7Z398 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF550Q7Z398 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
ZNF550Q7Z398 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
ZNF550Q7Z398 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF550Q7Z398 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.57■□□□□ 0.88
ZNF550Q7Z398 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF550Q7Z398 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
ZNF550Q7Z398 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF550Q7Z398 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.57■□□□□ 0.88
ZNF550Q7Z398 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF550Q7Z398 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
ZNF550Q7Z398 AC008406.3-201ENST00000620001 1374 ntBASIC20.57■□□□□ 0.88
ZNF550Q7Z398 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF550Q7Z398 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.56■□□□□ 0.88
ZNF550Q7Z398 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.56■□□□□ 0.88
ZNF550Q7Z398 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF550Q7Z398 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.56■□□□□ 0.88
ZNF550Q7Z398 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
ZNF550Q7Z398 MTDHP2-201ENST00000601468 714 ntBASIC20.56■□□□□ 0.88
ZNF550Q7Z398 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF550Q7Z398 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.56■□□□□ 0.88
ZNF550Q7Z398 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF550Q7Z398 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF550Q7Z398 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.56■□□□□ 0.88
ZNF550Q7Z398 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ZNF550Q7Z398 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.55■□□□□ 0.88
ZNF550Q7Z398 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF550Q7Z398 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF550Q7Z398 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF550Q7Z398 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF550Q7Z398 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ZNF550Q7Z398 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.55■□□□□ 0.88
ZNF550Q7Z398 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF550Q7Z398 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
ZNF550Q7Z398 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF550Q7Z398 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.55■□□□□ 0.88
ZNF550Q7Z398 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF550Q7Z398 C9orf163-202ENST00000624034 2573 ntBASIC20.55■□□□□ 0.88
ZNF550Q7Z398 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ZNF550Q7Z398 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF550Q7Z398 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF550Q7Z398 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF550Q7Z398 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF550Q7Z398 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF550Q7Z398 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.54■□□□□ 0.88
ZNF550Q7Z398 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF550Q7Z398 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF550Q7Z398 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.54■□□□□ 0.88
ZNF550Q7Z398 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF550Q7Z398 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF550Q7Z398 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF550Q7Z398 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.53■□□□□ 0.88
ZNF550Q7Z398 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF550Q7Z398 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.53■□□□□ 0.88
ZNF550Q7Z398 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.53■□□□□ 0.88
ZNF550Q7Z398 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF550Q7Z398 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF550Q7Z398 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
ZNF550Q7Z398 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF550Q7Z398 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF550Q7Z398 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
ZNF550Q7Z398 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF550Q7Z398 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF550Q7Z398 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF550Q7Z398 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF550Q7Z398 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
ZNF550Q7Z398 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF550Q7Z398 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.52■□□□□ 0.88
ZNF550Q7Z398 AC144652.1-201ENST00000609974 1624 ntBASIC20.52■□□□□ 0.88
ZNF550Q7Z398 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ZNF550Q7Z398 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC20.52■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms