Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PPP4R3AQ6IN85 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.45■■□□□ 1.66
PPP4R3AQ6IN85 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC25.45■■□□□ 1.66
PPP4R3AQ6IN85 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
PPP4R3AQ6IN85 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC25.44■■□□□ 1.66
PPP4R3AQ6IN85 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
PPP4R3AQ6IN85 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
PPP4R3AQ6IN85 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
PPP4R3AQ6IN85 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.44■■□□□ 1.66
PPP4R3AQ6IN85 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PPP4R3AQ6IN85 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
PPP4R3AQ6IN85 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PPP4R3AQ6IN85 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
PPP4R3AQ6IN85 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PPP4R3AQ6IN85 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
PPP4R3AQ6IN85 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC25.43■■□□□ 1.66
PPP4R3AQ6IN85 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PPP4R3AQ6IN85 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC25.43■■□□□ 1.66
PPP4R3AQ6IN85 AC241377.3-202ENST00000626088 1088 ntBASIC25.43■■□□□ 1.66
PPP4R3AQ6IN85 AC241585.3-202ENST00000628937 1088 ntBASIC25.43■■□□□ 1.66
PPP4R3AQ6IN85 AC245100.8-202ENST00000629247 1058 ntBASIC25.43■■□□□ 1.66
PPP4R3AQ6IN85 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PPP4R3AQ6IN85 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
PPP4R3AQ6IN85 AC008406.3-201ENST00000620001 1374 ntBASIC25.43■■□□□ 1.66
PPP4R3AQ6IN85 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.43■■□□□ 1.66
PPP4R3AQ6IN85 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
PPP4R3AQ6IN85 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
PPP4R3AQ6IN85 AL136116.3-201ENST00000402907 1138 ntBASIC25.42■■□□□ 1.66
PPP4R3AQ6IN85 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
PPP4R3AQ6IN85 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC25.42■■□□□ 1.66
PPP4R3AQ6IN85 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.42■■□□□ 1.66
PPP4R3AQ6IN85 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
PPP4R3AQ6IN85 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC25.41■■□□□ 1.66
PPP4R3AQ6IN85 LINC01529-204ENST00000636474 1715 ntBASIC25.41■■□□□ 1.66
PPP4R3AQ6IN85 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC25.41■■□□□ 1.66
PPP4R3AQ6IN85 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
PPP4R3AQ6IN85 DUX4L4-201ENST00000566884 1269 ntBASIC25.41■■□□□ 1.66
PPP4R3AQ6IN85 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC25.41■■□□□ 1.66
PPP4R3AQ6IN85 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC25.41■■□□□ 1.66
PPP4R3AQ6IN85 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PPP4R3AQ6IN85 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PPP4R3AQ6IN85 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PPP4R3AQ6IN85 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
PPP4R3AQ6IN85 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PPP4R3AQ6IN85 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PPP4R3AQ6IN85 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PPP4R3AQ6IN85 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PPP4R3AQ6IN85 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC25.4■■□□□ 1.66
PPP4R3AQ6IN85 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC25.4■■□□□ 1.66
PPP4R3AQ6IN85 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PPP4R3AQ6IN85 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PPP4R3AQ6IN85 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC25.4■■□□□ 1.66
PPP4R3AQ6IN85 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
PPP4R3AQ6IN85 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
PPP4R3AQ6IN85 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
PPP4R3AQ6IN85 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC25.4■■□□□ 1.66
PPP4R3AQ6IN85 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PPP4R3AQ6IN85 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PPP4R3AQ6IN85 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
PPP4R3AQ6IN85 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PPP4R3AQ6IN85 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
PPP4R3AQ6IN85 PEMT-206ENST00000435340 960 ntTSL 5 BASIC25.39■■□□□ 1.66
PPP4R3AQ6IN85 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.39■■□□□ 1.66
PPP4R3AQ6IN85 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
PPP4R3AQ6IN85 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.39■■□□□ 1.65
PPP4R3AQ6IN85 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PPP4R3AQ6IN85 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PPP4R3AQ6IN85 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
PPP4R3AQ6IN85 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PPP4R3AQ6IN85 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PPP4R3AQ6IN85 AC099791.2-201ENST00000605725 427 ntBASIC25.38■■□□□ 1.65
PPP4R3AQ6IN85 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.38■■□□□ 1.65
PPP4R3AQ6IN85 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
PPP4R3AQ6IN85 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PPP4R3AQ6IN85 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PPP4R3AQ6IN85 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PPP4R3AQ6IN85 AL353803.4-201ENST00000565882 1934 ntBASIC25.37■■□□□ 1.65
PPP4R3AQ6IN85 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PPP4R3AQ6IN85 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.37■■□□□ 1.65
PPP4R3AQ6IN85 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.37■■□□□ 1.65
PPP4R3AQ6IN85 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC25.37■■□□□ 1.65
PPP4R3AQ6IN85 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PPP4R3AQ6IN85 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PPP4R3AQ6IN85 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC25.37■■□□□ 1.65
PPP4R3AQ6IN85 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.37■■□□□ 1.65
PPP4R3AQ6IN85 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PPP4R3AQ6IN85 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.37■■□□□ 1.65
PPP4R3AQ6IN85 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PPP4R3AQ6IN85 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC25.36■■□□□ 1.65
PPP4R3AQ6IN85 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.36■■□□□ 1.65
PPP4R3AQ6IN85 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.36■■□□□ 1.65
PPP4R3AQ6IN85 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
PPP4R3AQ6IN85 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
PPP4R3AQ6IN85 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.36■■□□□ 1.65
PPP4R3AQ6IN85 AC092171.4-201ENST00000609130 632 ntBASIC25.36■■□□□ 1.65
PPP4R3AQ6IN85 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.36■■□□□ 1.65
PPP4R3AQ6IN85 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.36■■□□□ 1.65
PPP4R3AQ6IN85 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC25.35■■□□□ 1.65
PPP4R3AQ6IN85 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
PPP4R3AQ6IN85 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.35■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms