Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 FP325331.1-202ENST00000623531 1380 ntBASIC23.86■■□□□ 1.41
VARS2Q5ST30 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
VARS2Q5ST30 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC23.86■■□□□ 1.41
VARS2Q5ST30 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
VARS2Q5ST30 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
VARS2Q5ST30 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
VARS2Q5ST30 SLC47A1P1-202ENST00000449666 945 ntBASIC23.85■■□□□ 1.41
VARS2Q5ST30 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.85■■□□□ 1.41
VARS2Q5ST30 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.85■■□□□ 1.41
VARS2Q5ST30 AL499627.2-201ENST00000606283 725 ntBASIC23.85■■□□□ 1.41
VARS2Q5ST30 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
VARS2Q5ST30 AL139125.2-201ENST00000623134 1869 ntBASIC23.85■■□□□ 1.41
VARS2Q5ST30 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VARS2Q5ST30 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.84■■□□□ 1.41
VARS2Q5ST30 AC133637.1-201ENST00000624115 1537 ntBASIC23.84■■□□□ 1.41
VARS2Q5ST30 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VARS2Q5ST30 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VARS2Q5ST30 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
VARS2Q5ST30 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
VARS2Q5ST30 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC23.84■■□□□ 1.41
VARS2Q5ST30 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
VARS2Q5ST30 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
VARS2Q5ST30 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.83■■□□□ 1.41
VARS2Q5ST30 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.83■■□□□ 1.41
VARS2Q5ST30 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.83■■□□□ 1.41
VARS2Q5ST30 DUX4L4-201ENST00000566884 1269 ntBASIC23.83■■□□□ 1.41
VARS2Q5ST30 AC126544.1-201ENST00000580842 1059 ntBASIC23.83■■□□□ 1.41
VARS2Q5ST30 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
VARS2Q5ST30 AC144652.1-201ENST00000609974 1624 ntBASIC23.83■■□□□ 1.41
VARS2Q5ST30 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.83■■□□□ 1.4
VARS2Q5ST30 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.83■■□□□ 1.4
VARS2Q5ST30 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC23.83■■□□□ 1.4
VARS2Q5ST30 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
VARS2Q5ST30 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
VARS2Q5ST30 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VARS2Q5ST30 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
VARS2Q5ST30 AC004812.2-201ENST00000611079 2094 ntBASIC23.82■■□□□ 1.4
VARS2Q5ST30 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
VARS2Q5ST30 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC23.82■■□□□ 1.4
VARS2Q5ST30 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.82■■□□□ 1.4
VARS2Q5ST30 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.82■■□□□ 1.4
VARS2Q5ST30 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
VARS2Q5ST30 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC23.82■■□□□ 1.4
VARS2Q5ST30 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
VARS2Q5ST30 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC23.82■■□□□ 1.4
VARS2Q5ST30 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
VARS2Q5ST30 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
VARS2Q5ST30 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VARS2Q5ST30 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VARS2Q5ST30 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VARS2Q5ST30 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
VARS2Q5ST30 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
VARS2Q5ST30 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC23.81■■□□□ 1.4
VARS2Q5ST30 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
VARS2Q5ST30 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
VARS2Q5ST30 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.81■■□□□ 1.4
VARS2Q5ST30 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
VARS2Q5ST30 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
VARS2Q5ST30 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VARS2Q5ST30 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
VARS2Q5ST30 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
VARS2Q5ST30 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC23.8■■□□□ 1.4
VARS2Q5ST30 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
VARS2Q5ST30 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VARS2Q5ST30 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
VARS2Q5ST30 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VARS2Q5ST30 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
VARS2Q5ST30 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC23.8■■□□□ 1.4
VARS2Q5ST30 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
VARS2Q5ST30 MIR6821-201ENST00000617625 74 ntBASIC23.8■■□□□ 1.4
VARS2Q5ST30 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
VARS2Q5ST30 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.8■■□□□ 1.4
VARS2Q5ST30 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VARS2Q5ST30 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
VARS2Q5ST30 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VARS2Q5ST30 LINC01529-204ENST00000636474 1715 ntBASIC23.79■■□□□ 1.4
VARS2Q5ST30 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
VARS2Q5ST30 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC23.79■■□□□ 1.4
VARS2Q5ST30 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC23.79■■□□□ 1.4
VARS2Q5ST30 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC23.79■■□□□ 1.4
VARS2Q5ST30 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC23.79■■□□□ 1.4
VARS2Q5ST30 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VARS2Q5ST30 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VARS2Q5ST30 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VARS2Q5ST30 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
VARS2Q5ST30 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
VARS2Q5ST30 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VARS2Q5ST30 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC23.78■■□□□ 1.4
VARS2Q5ST30 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VARS2Q5ST30 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC23.78■■□□□ 1.4
VARS2Q5ST30 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VARS2Q5ST30 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VARS2Q5ST30 AC097381.1-201ENST00000429019 1296 ntBASIC23.78■■□□□ 1.4
VARS2Q5ST30 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC23.78■■□□□ 1.4
VARS2Q5ST30 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.78■■□□□ 1.4
VARS2Q5ST30 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC23.78■■□□□ 1.4
VARS2Q5ST30 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
VARS2Q5ST30 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
VARS2Q5ST30 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC23.78■■□□□ 1.4
VARS2Q5ST30 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms