Protein–RNA interactions for Protein: Q52LC2

ATP6AP1L, V-type proton ATPase subunit S1-like protein, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6AP1LQ52LC2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.61■■□□□ 1.05
ATP6AP1LQ52LC2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.61■■□□□ 1.05
ATP6AP1LQ52LC2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP6AP1LQ52LC2 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
ATP6AP1LQ52LC2 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ATP6AP1LQ52LC2 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.61■■□□□ 1.05
ATP6AP1LQ52LC2 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6AP1LQ52LC2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6AP1LQ52LC2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP6AP1LQ52LC2 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP6AP1LQ52LC2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.6■■□□□ 1.05
ATP6AP1LQ52LC2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6AP1LQ52LC2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6AP1LQ52LC2 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.6■■□□□ 1.05
ATP6AP1LQ52LC2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
ATP6AP1LQ52LC2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ATP6AP1LQ52LC2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6AP1LQ52LC2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6AP1LQ52LC2 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.59■■□□□ 1.05
ATP6AP1LQ52LC2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
ATP6AP1LQ52LC2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.59■■□□□ 1.05
ATP6AP1LQ52LC2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6AP1LQ52LC2 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ATP6AP1LQ52LC2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
ATP6AP1LQ52LC2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
ATP6AP1LQ52LC2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.58■■□□□ 1.05
ATP6AP1LQ52LC2 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
ATP6AP1LQ52LC2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6AP1LQ52LC2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.58■■□□□ 1.05
ATP6AP1LQ52LC2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.58■■□□□ 1.05
ATP6AP1LQ52LC2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6AP1LQ52LC2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6AP1LQ52LC2 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.58■■□□□ 1.04
ATP6AP1LQ52LC2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATP6AP1LQ52LC2 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
ATP6AP1LQ52LC2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATP6AP1LQ52LC2 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.58■■□□□ 1.04
ATP6AP1LQ52LC2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
ATP6AP1LQ52LC2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6AP1LQ52LC2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC21.57■■□□□ 1.04
ATP6AP1LQ52LC2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.57■■□□□ 1.04
ATP6AP1LQ52LC2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
ATP6AP1LQ52LC2 MIR4508-201ENST00000584178 70 ntBASIC21.57■■□□□ 1.04
ATP6AP1LQ52LC2 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6AP1LQ52LC2 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6AP1LQ52LC2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6AP1LQ52LC2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6AP1LQ52LC2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.57■■□□□ 1.04
ATP6AP1LQ52LC2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP6AP1LQ52LC2 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP6AP1LQ52LC2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC21.56■■□□□ 1.04
ATP6AP1LQ52LC2 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP6AP1LQ52LC2 LINC00526-201ENST00000581067 1875 ntBASIC21.56■■□□□ 1.04
ATP6AP1LQ52LC2 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATP6AP1LQ52LC2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP6AP1LQ52LC2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ATP6AP1LQ52LC2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.56■■□□□ 1.04
ATP6AP1LQ52LC2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ATP6AP1LQ52LC2 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ATP6AP1LQ52LC2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP6AP1LQ52LC2 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP6AP1LQ52LC2 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ATP6AP1LQ52LC2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP6AP1LQ52LC2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATP6AP1LQ52LC2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATP6AP1LQ52LC2 ESRRAP2-201ENST00000418437 1549 ntBASIC21.55■■□□□ 1.04
ATP6AP1LQ52LC2 ECEL1P1-201ENST00000373592 1742 ntBASIC21.55■■□□□ 1.04
ATP6AP1LQ52LC2 AL353803.4-201ENST00000565882 1934 ntBASIC21.55■■□□□ 1.04
ATP6AP1LQ52LC2 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATP6AP1LQ52LC2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATP6AP1LQ52LC2 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP6AP1LQ52LC2 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6AP1LQ52LC2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6AP1LQ52LC2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6AP1LQ52LC2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6AP1LQ52LC2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP6AP1LQ52LC2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6AP1LQ52LC2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP6AP1LQ52LC2 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC21.54■■□□□ 1.04
ATP6AP1LQ52LC2 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.54■■□□□ 1.04
ATP6AP1LQ52LC2 CLDN5-201ENST00000403084 2357 ntBASIC21.54■■□□□ 1.04
ATP6AP1LQ52LC2 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP6AP1LQ52LC2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
ATP6AP1LQ52LC2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP6AP1LQ52LC2 PKD1P6-201ENST00000343738 4769 ntBASIC21.53■■□□□ 1.04
ATP6AP1LQ52LC2 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6AP1LQ52LC2 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6AP1LQ52LC2 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
ATP6AP1LQ52LC2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC21.53■■□□□ 1.04
ATP6AP1LQ52LC2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6AP1LQ52LC2 AC012354.3-201ENST00000623734 483 ntBASIC21.53■■□□□ 1.04
ATP6AP1LQ52LC2 LINC00565-201ENST00000562710 2331 ntBASIC21.53■■□□□ 1.04
ATP6AP1LQ52LC2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ATP6AP1LQ52LC2 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
ATP6AP1LQ52LC2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.53■■□□□ 1.04
ATP6AP1LQ52LC2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6AP1LQ52LC2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6AP1LQ52LC2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC21.52■■□□□ 1.04
ATP6AP1LQ52LC2 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ATP6AP1LQ52LC2 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms