Protein–RNA interactions for Protein: Q504U0

C4orf46, Renal cancer differentiation gene 1 protein, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46Q504U0 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
C4orf46Q504U0 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C4orf46Q504U0 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
C4orf46Q504U0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C4orf46Q504U0 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C4orf46Q504U0 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.94■□□□□ 0.62
C4orf46Q504U0 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.94■□□□□ 0.62
C4orf46Q504U0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.94■□□□□ 0.62
C4orf46Q504U0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.94■□□□□ 0.62
C4orf46Q504U0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.94■□□□□ 0.62
C4orf46Q504U0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
C4orf46Q504U0 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.94■□□□□ 0.62
C4orf46Q504U0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.94■□□□□ 0.62
C4orf46Q504U0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
C4orf46Q504U0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.93■□□□□ 0.62
C4orf46Q504U0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.93■□□□□ 0.62
C4orf46Q504U0 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C4orf46Q504U0 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC18.93■□□□□ 0.62
C4orf46Q504U0 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
C4orf46Q504U0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C4orf46Q504U0 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
C4orf46Q504U0 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
C4orf46Q504U0 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C4orf46Q504U0 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.92■□□□□ 0.62
C4orf46Q504U0 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
C4orf46Q504U0 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
C4orf46Q504U0 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
C4orf46Q504U0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.92■□□□□ 0.62
C4orf46Q504U0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.92■□□□□ 0.62
C4orf46Q504U0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.92■□□□□ 0.62
C4orf46Q504U0 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
C4orf46Q504U0 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
C4orf46Q504U0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.92■□□□□ 0.62
C4orf46Q504U0 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
C4orf46Q504U0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C4orf46Q504U0 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
C4orf46Q504U0 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.91■□□□□ 0.62
C4orf46Q504U0 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
C4orf46Q504U0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.91■□□□□ 0.62
C4orf46Q504U0 C11orf96-202ENST00000528572 1834 ntBASIC18.91■□□□□ 0.62
C4orf46Q504U0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C4orf46Q504U0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.91■□□□□ 0.62
C4orf46Q504U0 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
C4orf46Q504U0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.91■□□□□ 0.62
C4orf46Q504U0 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C4orf46Q504U0 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
C4orf46Q504U0 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
C4orf46Q504U0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C4orf46Q504U0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
C4orf46Q504U0 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C4orf46Q504U0 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
C4orf46Q504U0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
C4orf46Q504U0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
C4orf46Q504U0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.9■□□□□ 0.62
C4orf46Q504U0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
C4orf46Q504U0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC18.9■□□□□ 0.62
C4orf46Q504U0 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
C4orf46Q504U0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.9■□□□□ 0.62
C4orf46Q504U0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
C4orf46Q504U0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
C4orf46Q504U0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
C4orf46Q504U0 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.9■□□□□ 0.62
C4orf46Q504U0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
C4orf46Q504U0 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.89■□□□□ 0.62
C4orf46Q504U0 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC18.89■□□□□ 0.62
C4orf46Q504U0 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.89■□□□□ 0.61
C4orf46Q504U0 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C4orf46Q504U0 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C4orf46Q504U0 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.89■□□□□ 0.61
C4orf46Q504U0 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
C4orf46Q504U0 AC025884.2-201ENST00000553429 711 ntBASIC18.89■□□□□ 0.61
C4orf46Q504U0 DUX4L11-201ENST00000611504 1267 ntBASIC18.89■□□□□ 0.61
C4orf46Q504U0 DUX4L12-201ENST00000614593 1267 ntBASIC18.89■□□□□ 0.61
C4orf46Q504U0 DUX4L14-201ENST00000621227 1267 ntBASIC18.89■□□□□ 0.61
C4orf46Q504U0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.89■□□□□ 0.61
C4orf46Q504U0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
C4orf46Q504U0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C4orf46Q504U0 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C4orf46Q504U0 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C4orf46Q504U0 AL161729.1-201ENST00000604104 1402 ntBASIC18.89■□□□□ 0.61
C4orf46Q504U0 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C4orf46Q504U0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
C4orf46Q504U0 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
C4orf46Q504U0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
C4orf46Q504U0 AC092053.2-201ENST00000640557 1818 ntBASIC18.88■□□□□ 0.61
C4orf46Q504U0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C4orf46Q504U0 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C4orf46Q504U0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.88■□□□□ 0.61
C4orf46Q504U0 FBXW4P1-201ENST00000426721 2239 ntBASIC18.88■□□□□ 0.61
C4orf46Q504U0 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
C4orf46Q504U0 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.88■□□□□ 0.61
C4orf46Q504U0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C4orf46Q504U0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C4orf46Q504U0 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.88■□□□□ 0.61
C4orf46Q504U0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
C4orf46Q504U0 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.88■□□□□ 0.61
C4orf46Q504U0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
C4orf46Q504U0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.88■□□□□ 0.61
C4orf46Q504U0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
C4orf46Q504U0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms