Protein–RNA interactions for Protein: Q2M2D7

TBC1D28, TBC1 domain family member 28, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D28Q2M2D7 AC241585.3-202ENST00000628937 1088 ntBASIC19.45■□□□□ 0.7
TBC1D28Q2M2D7 AC245100.8-202ENST00000629247 1058 ntBASIC19.45■□□□□ 0.7
TBC1D28Q2M2D7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D28Q2M2D7 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TBC1D28Q2M2D7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
TBC1D28Q2M2D7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.45■□□□□ 0.7
TBC1D28Q2M2D7 FP325331.1-202ENST00000623531 1380 ntBASIC19.44■□□□□ 0.7
TBC1D28Q2M2D7 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.44■□□□□ 0.7
TBC1D28Q2M2D7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC19.44■□□□□ 0.7
TBC1D28Q2M2D7 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D28Q2M2D7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D28Q2M2D7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D28Q2M2D7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D28Q2M2D7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.44■□□□□ 0.7
TBC1D28Q2M2D7 AC092171.4-201ENST00000609130 632 ntBASIC19.44■□□□□ 0.7
TBC1D28Q2M2D7 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.44■□□□□ 0.7
TBC1D28Q2M2D7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.44■□□□□ 0.7
TBC1D28Q2M2D7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D28Q2M2D7 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC19.44■□□□□ 0.7
TBC1D28Q2M2D7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TBC1D28Q2M2D7 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
TBC1D28Q2M2D7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D28Q2M2D7 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC19.43■□□□□ 0.7
TBC1D28Q2M2D7 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TBC1D28Q2M2D7 AC092068.2-201ENST00000590491 1708 ntBASIC19.43■□□□□ 0.7
TBC1D28Q2M2D7 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.43■□□□□ 0.7
TBC1D28Q2M2D7 AL136116.3-201ENST00000402907 1138 ntBASIC19.43■□□□□ 0.7
TBC1D28Q2M2D7 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
TBC1D28Q2M2D7 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.43■□□□□ 0.7
TBC1D28Q2M2D7 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TBC1D28Q2M2D7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D28Q2M2D7 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.42■□□□□ 0.7
TBC1D28Q2M2D7 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.42■□□□□ 0.7
TBC1D28Q2M2D7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.42■□□□□ 0.7
TBC1D28Q2M2D7 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D28Q2M2D7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D28Q2M2D7 MIR4466-201ENST00000606121 54 ntBASIC19.42■□□□□ 0.7
TBC1D28Q2M2D7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D28Q2M2D7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D28Q2M2D7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TBC1D28Q2M2D7 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
TBC1D28Q2M2D7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.42■□□□□ 0.7
TBC1D28Q2M2D7 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.42■□□□□ 0.7
TBC1D28Q2M2D7 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TBC1D28Q2M2D7 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.41■□□□□ 0.7
TBC1D28Q2M2D7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.41■□□□□ 0.7
TBC1D28Q2M2D7 LINC01529-204ENST00000636474 1715 ntBASIC19.41■□□□□ 0.7
TBC1D28Q2M2D7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.41■□□□□ 0.7
TBC1D28Q2M2D7 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TBC1D28Q2M2D7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.41■□□□□ 0.7
TBC1D28Q2M2D7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.41■□□□□ 0.7
TBC1D28Q2M2D7 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.41■□□□□ 0.7
TBC1D28Q2M2D7 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TBC1D28Q2M2D7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D28Q2M2D7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TBC1D28Q2M2D7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.4■□□□□ 0.7
TBC1D28Q2M2D7 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.4■□□□□ 0.7
TBC1D28Q2M2D7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D28Q2M2D7 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.4■□□□□ 0.7
TBC1D28Q2M2D7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D28Q2M2D7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D28Q2M2D7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TBC1D28Q2M2D7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TBC1D28Q2M2D7 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.4■□□□□ 0.7
TBC1D28Q2M2D7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TBC1D28Q2M2D7 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TBC1D28Q2M2D7 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TBC1D28Q2M2D7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TBC1D28Q2M2D7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D28Q2M2D7 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D28Q2M2D7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D28Q2M2D7 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.39■□□□□ 0.69
TBC1D28Q2M2D7 AC009086.3-201ENST00000623486 1008 ntBASIC19.39■□□□□ 0.69
TBC1D28Q2M2D7 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D28Q2M2D7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D28Q2M2D7 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
TBC1D28Q2M2D7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D28Q2M2D7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
TBC1D28Q2M2D7 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TBC1D28Q2M2D7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D28Q2M2D7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
TBC1D28Q2M2D7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D28Q2M2D7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TBC1D28Q2M2D7 AC099791.2-201ENST00000605725 427 ntBASIC19.38■□□□□ 0.69
TBC1D28Q2M2D7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D28Q2M2D7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D28Q2M2D7 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D28Q2M2D7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.37■□□□□ 0.69
TBC1D28Q2M2D7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.37■□□□□ 0.69
TBC1D28Q2M2D7 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.37■□□□□ 0.69
TBC1D28Q2M2D7 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC19.37■□□□□ 0.69
TBC1D28Q2M2D7 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D28Q2M2D7 DUX4L4-201ENST00000566884 1269 ntBASIC19.37■□□□□ 0.69
TBC1D28Q2M2D7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.37■□□□□ 0.69
TBC1D28Q2M2D7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D28Q2M2D7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D28Q2M2D7 AL353803.4-201ENST00000565882 1934 ntBASIC19.37■□□□□ 0.69
TBC1D28Q2M2D7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TBC1D28Q2M2D7 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.37■□□□□ 0.69
TBC1D28Q2M2D7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms