Protein–RNA interactions for Protein: Q08722

CD47, Leukocyte surface antigen CD47, humanhuman

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD47Q08722 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD47Q08722 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.74■□□□□ 0.91
CD47Q08722 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD47Q08722 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.74■□□□□ 0.91
CD47Q08722 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD47Q08722 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CD47Q08722 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD47Q08722 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CD47Q08722 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CD47Q08722 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD47Q08722 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.73■□□□□ 0.91
CD47Q08722 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CD47Q08722 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD47Q08722 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CD47Q08722 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CD47Q08722 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.72■□□□□ 0.91
CD47Q08722 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
CD47Q08722 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD47Q08722 LONRF2P2-201ENST00000439212 571 ntBASIC20.72■□□□□ 0.91
CD47Q08722 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.72■□□□□ 0.91
CD47Q08722 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CD47Q08722 BHLHE23-202ENST00000612929 1109 ntBASIC20.72■□□□□ 0.91
CD47Q08722 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.72■□□□□ 0.91
CD47Q08722 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.72■□□□□ 0.91
CD47Q08722 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.72■□□□□ 0.91
CD47Q08722 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CD47Q08722 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
CD47Q08722 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.72■□□□□ 0.91
CD47Q08722 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
CD47Q08722 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD47Q08722 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
CD47Q08722 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD47Q08722 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.71■□□□□ 0.91
CD47Q08722 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.71■□□□□ 0.91
CD47Q08722 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.71■□□□□ 0.91
CD47Q08722 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CD47Q08722 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.71■□□□□ 0.91
CD47Q08722 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CD47Q08722 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.71■□□□□ 0.91
CD47Q08722 AL161729.1-201ENST00000604104 1402 ntBASIC20.7■□□□□ 0.9
CD47Q08722 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD47Q08722 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD47Q08722 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.7■□□□□ 0.9
CD47Q08722 ESRRAP2-201ENST00000418437 1549 ntBASIC20.7■□□□□ 0.9
CD47Q08722 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.7■□□□□ 0.9
CD47Q08722 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD47Q08722 ATP5G2P3-201ENST00000429083 425 ntBASIC20.7■□□□□ 0.9
CD47Q08722 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CD47Q08722 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD47Q08722 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.7■□□□□ 0.9
CD47Q08722 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD47Q08722 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CD47Q08722 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CD47Q08722 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.7■□□□□ 0.9
CD47Q08722 AC090877.2-201ENST00000558441 1738 ntBASIC20.7■□□□□ 0.9
CD47Q08722 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
CD47Q08722 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD47Q08722 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CD47Q08722 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.69■□□□□ 0.9
CD47Q08722 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD47Q08722 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.69■□□□□ 0.9
CD47Q08722 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD47Q08722 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD47Q08722 AC004987.1-201ENST00000428627 508 ntBASIC20.69■□□□□ 0.9
CD47Q08722 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD47Q08722 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CD47Q08722 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.69■□□□□ 0.9
CD47Q08722 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CD47Q08722 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.68■□□□□ 0.9
CD47Q08722 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD47Q08722 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD47Q08722 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.68■□□□□ 0.9
CD47Q08722 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD47Q08722 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
CD47Q08722 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD47Q08722 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CD47Q08722 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CD47Q08722 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD47Q08722 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.67■□□□□ 0.9
CD47Q08722 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD47Q08722 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.67■□□□□ 0.9
CD47Q08722 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.67■□□□□ 0.9
CD47Q08722 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.67■□□□□ 0.9
CD47Q08722 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CD47Q08722 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD47Q08722 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD47Q08722 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CD47Q08722 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CD47Q08722 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC20.66■□□□□ 0.9
CD47Q08722 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD47Q08722 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD47Q08722 TSPY13P-201ENST00000338964 914 ntBASIC20.66■□□□□ 0.9
CD47Q08722 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD47Q08722 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CD47Q08722 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.66■□□□□ 0.9
CD47Q08722 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.66■□□□□ 0.9
CD47Q08722 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CD47Q08722 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.66■□□□□ 0.9
CD47Q08722 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CD47Q08722 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms