Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX6-1P78426 ALDH1A3-203ENST00000557963 1670 ntBASIC19.62■□□□□ 0.73
NKX6-1P78426 AC141586.4-201ENST00000624558 1573 ntBASIC19.62■□□□□ 0.73
NKX6-1P78426 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
NKX6-1P78426 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX6-1P78426 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX6-1P78426 AC092171.4-201ENST00000609130 632 ntBASIC19.62■□□□□ 0.73
NKX6-1P78426 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX6-1P78426 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
NKX6-1P78426 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
NKX6-1P78426 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX6-1P78426 SYT6-210ENST00000641643 1587 ntBASIC19.61■□□□□ 0.73
NKX6-1P78426 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NKX6-1P78426 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX6-1P78426 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX6-1P78426 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX6-1P78426 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
NKX6-1P78426 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NKX6-1P78426 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.61■□□□□ 0.73
NKX6-1P78426 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX6-1P78426 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX6-1P78426 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
NKX6-1P78426 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
NKX6-1P78426 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.6■□□□□ 0.73
NKX6-1P78426 LINC00543-201ENST00000567234 1845 ntBASIC19.6■□□□□ 0.73
NKX6-1P78426 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.6■□□□□ 0.73
NKX6-1P78426 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
NKX6-1P78426 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.6■□□□□ 0.73
NKX6-1P78426 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX6-1P78426 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.6■□□□□ 0.73
NKX6-1P78426 AL162430.1-201ENST00000480705 870 ntBASIC19.6■□□□□ 0.73
NKX6-1P78426 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.6■□□□□ 0.73
NKX6-1P78426 AC087623.3-201ENST00000607047 1098 ntBASIC19.6■□□□□ 0.73
NKX6-1P78426 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.6■□□□□ 0.73
NKX6-1P78426 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
NKX6-1P78426 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
NKX6-1P78426 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NKX6-1P78426 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX6-1P78426 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX6-1P78426 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX6-1P78426 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX6-1P78426 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.59■□□□□ 0.73
NKX6-1P78426 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.59■□□□□ 0.73
NKX6-1P78426 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NKX6-1P78426 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX6-1P78426 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.59■□□□□ 0.73
NKX6-1P78426 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX6-1P78426 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX6-1P78426 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NKX6-1P78426 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX6-1P78426 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NKX6-1P78426 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.58■□□□□ 0.73
NKX6-1P78426 LINC01124-201ENST00000409786 2117 ntBASIC19.58■□□□□ 0.73
NKX6-1P78426 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.58■□□□□ 0.73
NKX6-1P78426 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
NKX6-1P78426 THRA-202ENST00000394121 2260 ntTSL 2 BASIC19.58■□□□□ 0.73
NKX6-1P78426 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NKX6-1P78426 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NKX6-1P78426 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.58■□□□□ 0.72
NKX6-1P78426 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NKX6-1P78426 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NKX6-1P78426 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NKX6-1P78426 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX6-1P78426 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX6-1P78426 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.57■□□□□ 0.72
NKX6-1P78426 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX6-1P78426 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NKX6-1P78426 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
NKX6-1P78426 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX6-1P78426 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NKX6-1P78426 MIR4767-201ENST00000582827 78 ntBASIC19.57■□□□□ 0.72
NKX6-1P78426 CA15P2-201ENST00000611168 834 ntBASIC19.57■□□□□ 0.72
NKX6-1P78426 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NKX6-1P78426 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NKX6-1P78426 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.57■□□□□ 0.72
NKX6-1P78426 RASA4CP-201ENST00000424092 1398 ntBASIC19.57■□□□□ 0.72
NKX6-1P78426 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NKX6-1P78426 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
NKX6-1P78426 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
NKX6-1P78426 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX6-1P78426 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.56■□□□□ 0.72
NKX6-1P78426 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NKX6-1P78426 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.56■□□□□ 0.72
NKX6-1P78426 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC19.56■□□□□ 0.72
NKX6-1P78426 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
NKX6-1P78426 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NKX6-1P78426 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.56■□□□□ 0.72
NKX6-1P78426 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC19.56■□□□□ 0.72
NKX6-1P78426 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NKX6-1P78426 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
NKX6-1P78426 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.55■□□□□ 0.72
NKX6-1P78426 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NKX6-1P78426 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.55■□□□□ 0.72
NKX6-1P78426 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NKX6-1P78426 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.55■□□□□ 0.72
NKX6-1P78426 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.55■□□□□ 0.72
NKX6-1P78426 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
NKX6-1P78426 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
NKX6-1P78426 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.55■□□□□ 0.72
NKX6-1P78426 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms