Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
DEFA3P59666 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.7■□□□□ 0.74
DEFA3P59666 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.7■□□□□ 0.74
DEFA3P59666 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
DEFA3P59666 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
DEFA3P59666 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DEFA3P59666 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DEFA3P59666 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DEFA3P59666 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DEFA3P59666 AC026310.3-201ENST00000625186 2373 ntBASIC19.69■□□□□ 0.74
DEFA3P59666 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
DEFA3P59666 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DEFA3P59666 MIR762-201ENST00000390236 83 ntBASIC19.69■□□□□ 0.74
DEFA3P59666 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DEFA3P59666 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DEFA3P59666 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
DEFA3P59666 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
DEFA3P59666 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DEFA3P59666 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
DEFA3P59666 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
DEFA3P59666 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC19.69■□□□□ 0.74
DEFA3P59666 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
DEFA3P59666 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
DEFA3P59666 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
DEFA3P59666 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
DEFA3P59666 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DEFA3P59666 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DEFA3P59666 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DEFA3P59666 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DEFA3P59666 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
DEFA3P59666 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DEFA3P59666 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
DEFA3P59666 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DEFA3P59666 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
DEFA3P59666 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.68■□□□□ 0.74
DEFA3P59666 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DEFA3P59666 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DEFA3P59666 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
DEFA3P59666 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
DEFA3P59666 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DEFA3P59666 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DEFA3P59666 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
DEFA3P59666 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
DEFA3P59666 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
DEFA3P59666 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
DEFA3P59666 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
DEFA3P59666 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
DEFA3P59666 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DEFA3P59666 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
DEFA3P59666 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
DEFA3P59666 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
DEFA3P59666 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.66■□□□□ 0.74
DEFA3P59666 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DEFA3P59666 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.66■□□□□ 0.74
DEFA3P59666 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DEFA3P59666 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
DEFA3P59666 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
DEFA3P59666 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.66■□□□□ 0.74
DEFA3P59666 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.66■□□□□ 0.74
DEFA3P59666 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
DEFA3P59666 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.66■□□□□ 0.74
DEFA3P59666 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
DEFA3P59666 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
DEFA3P59666 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
DEFA3P59666 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
DEFA3P59666 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEFA3P59666 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.65■□□□□ 0.74
DEFA3P59666 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEFA3P59666 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEFA3P59666 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEFA3P59666 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.65■□□□□ 0.74
DEFA3P59666 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEFA3P59666 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEFA3P59666 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEFA3P59666 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.65■□□□□ 0.74
DEFA3P59666 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DEFA3P59666 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
DEFA3P59666 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC19.65■□□□□ 0.74
DEFA3P59666 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
DEFA3P59666 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEFA3P59666 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
DEFA3P59666 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
DEFA3P59666 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
DEFA3P59666 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
DEFA3P59666 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
DEFA3P59666 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.64■□□□□ 0.74
DEFA3P59666 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
DEFA3P59666 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.64■□□□□ 0.73
DEFA3P59666 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DEFA3P59666 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.64■□□□□ 0.73
DEFA3P59666 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
DEFA3P59666 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.64■□□□□ 0.73
DEFA3P59666 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DEFA3P59666 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
DEFA3P59666 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
DEFA3P59666 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.63■□□□□ 0.73
DEFA3P59666 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
DEFA3P59666 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
DEFA3P59666 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.63■□□□□ 0.73
DEFA3P59666 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms