Protein–RNA interactions for Protein: P54860

UFD2, E4 ubiquitin-protein ligase UFD2, yeastyeast

Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD2P54860 IRC13YOR235W 315 nt6.35□□□□□ -1.39
UFD2P54860 SPP381YBR152W 876 nt6.35□□□□□ -1.39
UFD2P54860 PAT1YCR077C 2391 nt6.35□□□□□ -1.39
UFD2P54860 YDR261W-AYDR261W-A 1317 nt6.34□□□□□ -1.39
UFD2P54860 HXT17YNR072W 1695 nt6.34□□□□□ -1.39
UFD2P54860 RTA1YGR213C 954 nt6.34□□□□□ -1.39
UFD2P54860 TVP38YKR088C 1014 nt6.34□□□□□ -1.39
UFD2P54860 YNL320WYNL320W 855 nt6.34□□□□□ -1.39
UFD2P54860 RPS15YOL040C 429 nt6.34□□□□□ -1.39
UFD2P54860 YOL097W-AYOL097W-A 186 nt6.34□□□□□ -1.39
UFD2P54860 NUD1YOR373W 2556 nt6.34□□□□□ -1.39
UFD2P54860 SAS10YDL153C 1833 nt6.34□□□□□ -1.4
UFD2P54860 CLB2YPR119W 1476 nt6.34□□□□□ -1.4
UFD2P54860 ZRC1YMR243C 1329 nt6.33□□□□□ -1.4
UFD2P54860 EMW1YNL313C 2715 nt6.33□□□□□ -1.4
UFD2P54860 CTH1YDR151C 978 nt6.33□□□□□ -1.4
UFD2P54860 DAL3YIR032C 588 nt6.33□□□□□ -1.4
UFD2P54860 FIP1YJR093C 984 nt6.33□□□□□ -1.4
UFD2P54860 MRPL13YKR006C 795 nt6.33□□□□□ -1.4
UFD2P54860 YLR456WYLR456W 615 nt6.33□□□□□ -1.4
UFD2P54860 INP1YMR204C 1263 nt6.33□□□□□ -1.4
UFD2P54860 CUS2YNL286W 858 nt6.33□□□□□ -1.4
UFD2P54860 AIM39YOL053W 1188 nt6.33□□□□□ -1.4
UFD2P54860 YOL131WYOL131W 327 nt6.33□□□□□ -1.4
UFD2P54860 YBR116CYBR116C 528 nt6.33□□□□□ -1.4
UFD2P54860 APE1YKL103C 1545 nt6.33□□□□□ -1.4
UFD2P54860 HXK2YGL253W 1461 nt6.33□□□□□ -1.4
UFD2P54860 GAS5YOL030W 1455 nt6.33□□□□□ -1.4
UFD2P54860 ATG1YGL180W 2694 nt6.32□□□□□ -1.4
UFD2P54860 snR56snR56 88 nt6.32□□□□□ -1.4
UFD2P54860 IDP1YDL066W 1287 nt6.32□□□□□ -1.4
UFD2P54860 MLC1YGL106W 450 nt6.32□□□□□ -1.4
UFD2P54860 PFS1YHR185C 714 nt6.32□□□□□ -1.4
UFD2P54860 YJL218WYJL218W 591 nt6.32□□□□□ -1.4
UFD2P54860 VPS25YJR102C 609 nt6.32□□□□□ -1.4
UFD2P54860 BUD17YNR027W 954 nt6.32□□□□□ -1.4
UFD2P54860 ARA1YBR149W 1035 nt6.32□□□□□ -1.4
UFD2P54860 ICS2YBR157C 768 nt6.32□□□□□ -1.4
UFD2P54860 PDB1YBR221C 1101 nt6.32□□□□□ -1.4
UFD2P54860 YBR255C-AYBR255C-A 363 nt6.32□□□□□ -1.4
UFD2P54860 MRC1YCL061C 3291 nt6.32□□□□□ -1.4
UFD2P54860 CLB1YGR108W 1416 nt6.32□□□□□ -1.4
UFD2P54860 YFL042CYFL042C 2025 nt6.32□□□□□ -1.4
UFD2P54860 KNH1YDL049C 807 nt6.31□□□□□ -1.4
UFD2P54860 CBS1YDL069C 690 nt6.31□□□□□ -1.4
UFD2P54860 YDR056CYDR056C 618 nt6.31□□□□□ -1.4
UFD2P54860 DOG2YHR043C 741 nt6.31□□□□□ -1.4
UFD2P54860 DOG1YHR044C 741 nt6.31□□□□□ -1.4
UFD2P54860 YLR379WYLR379W 375 nt6.31□□□□□ -1.4
UFD2P54860 TYE7YOR344C 876 nt6.31□□□□□ -1.4
UFD2P54860 snR44snR44 211 nt6.31□□□□□ -1.4
UFD2P54860 BZZ1YHR114W 1902 nt6.31□□□□□ -1.4
UFD2P54860 FBP26YJL155C 1359 nt6.31□□□□□ -1.4
UFD2P54860 TYR1YBR166C 1359 nt6.31□□□□□ -1.4
UFD2P54860 TEA1YOR337W 2280 nt6.3□□□□□ -1.4
UFD2P54860 CBP1YJL209W 1965 nt6.3□□□□□ -1.4
UFD2P54860 SCM3YDL139C 672 nt6.3□□□□□ -1.4
UFD2P54860 PRP38YGR075C 729 nt6.3□□□□□ -1.4
UFD2P54860 PEX21YGR239C 867 nt6.3□□□□□ -1.4
UFD2P54860 SHE1YBL031W 1017 nt6.3□□□□□ -1.4
UFD2P54860 DUG3YNL191W 1074 nt6.3□□□□□ -1.4
UFD2P54860 ATG34YOL083W 1239 nt6.3□□□□□ -1.4
UFD2P54860 NHP6BYBR089C-A 300 nt6.3□□□□□ -1.4
UFD2P54860 YTM1YOR272W 1383 nt6.3□□□□□ -1.4
UFD2P54860 TEF1YPR080W 1377 nt6.3□□□□□ -1.4
UFD2P54860 TEF2YBR118W 1377 nt6.3□□□□□ -1.4
UFD2P54860 TOS4YLR183C 1470 nt6.29□□□□□ -1.4
UFD2P54860 UBX2YML013W 1755 nt6.29□□□□□ -1.4
UFD2P54860 VAC17YCL063W 1272 nt6.29□□□□□ -1.4
UFD2P54860 AIM19YIL087C 474 nt6.29□□□□□ -1.4
UFD2P54860 TIM54YJL054W 1437 nt6.29□□□□□ -1.4
UFD2P54860 TMA16YOR252W 537 nt6.29□□□□□ -1.4
UFD2P54860 COX11YPL132W 903 nt6.29□□□□□ -1.4
UFD2P54860 MUD1YBR119W 897 nt6.29□□□□□ -1.4
UFD2P54860 RPS9BYBR189W 588 nt6.29□□□□□ -1.4
UFD2P54860 YBR287WYBR287W 1284 nt6.29□□□□□ -1.4
UFD2P54860 RRP7YCL031C 894 nt6.29□□□□□ -1.4
UFD2P54860 YDR444WYDR444W 2064 nt6.29□□□□□ -1.4
UFD2P54860 HXT4YHR092C 1731 nt6.28□□□□□ -1.4
UFD2P54860 ASN1YPR145W 1719 nt6.28□□□□□ -1.4
UFD2P54860 GEX2YKR106W 1848 nt6.28□□□□□ -1.4
UFD2P54860 HSP42YDR171W 1128 nt6.28□□□□□ -1.4
UFD2P54860 PRE1YER012W 597 nt6.28□□□□□ -1.4
UFD2P54860 RPL22BYFL034C-A 369 nt6.28□□□□□ -1.4
UFD2P54860 MF(ALPHA)2YGL089C 363 nt6.28□□□□□ -1.4
UFD2P54860 COS8YHL048W 1146 nt6.28□□□□□ -1.4
UFD2P54860 YIL028WYIL028W 399 nt6.28□□□□□ -1.4
UFD2P54860 MMM1YLL006W 1281 nt6.28□□□□□ -1.4
UFD2P54860 YAL069WYAL069W 315 nt6.28□□□□□ -1.4
UFD2P54860 REC102YLR329W 795 nt6.28□□□□□ -1.4
UFD2P54860 YMR030W-AYMR030W-A 291 nt6.28□□□□□ -1.4
UFD2P54860 SRT1YMR101C 1032 nt6.28□□□□□ -1.4
UFD2P54860 MRPL16YBL038W 699 nt6.28□□□□□ -1.4
UFD2P54860 YOR032W-AYOR032W-A 201 nt6.28□□□□□ -1.4
UFD2P54860 GRE1YPL223C 507 nt6.28□□□□□ -1.4
UFD2P54860 CCL1YPR025C 1182 nt6.28□□□□□ -1.4
UFD2P54860 BDP1YNL039W 1785 nt6.28□□□□□ -1.4
UFD2P54860 SAG1YJR004C 1953 nt6.27□□□□□ -1.4
UFD2P54860 TRM13YOL125W 1431 nt6.27□□□□□ -1.41
UFD2P54860 ALT1YLR089C 1779 nt6.27□□□□□ -1.41
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms