Protein–RNA interactions for Protein: P53044

UFD1, Ubiquitin fusion degradation protein 1, yeastyeast

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UFD1P53044 NVJ1YHR195W 966 nt3.88□□□□□ -1.79
UFD1P53044 YJL218WYJL218W 591 nt3.88□□□□□ -1.79
UFD1P53044 NMA1YLR328W 1206 nt3.88□□□□□ -1.79
UFD1P53044 YMR086C-AYMR086C-A 339 nt3.88□□□□□ -1.79
UFD1P53044 MGR2YPL098C 342 nt3.88□□□□□ -1.79
UFD1P53044 YPR174CYPR174C 666 nt3.88□□□□□ -1.79
UFD1P53044 THI7YLR237W 1797 nt3.88□□□□□ -1.79
UFD1P53044 TOG1YER184C 2385 nt3.88□□□□□ -1.79
UFD1P53044 OSH2YDL019C 3852 nt3.87□□□□□ -1.79
UFD1P53044 RNA15YGL044C 891 nt3.87□□□□□ -1.79
UFD1P53044 FMP48YGR052W 1110 nt3.87□□□□□ -1.79
UFD1P53044 YIL171W-AYIL171W-A 453 nt3.87□□□□□ -1.79
UFD1P53044 YJL220WYJL220W 453 nt3.87□□□□□ -1.79
UFD1P53044 LSO1YJR005C-A 282 nt3.87□□□□□ -1.79
UFD1P53044 SRN2YLR119W 642 nt3.87□□□□□ -1.79
UFD1P53044 FBP1YLR377C 1047 nt3.87□□□□□ -1.79
UFD1P53044 YBL029WYBL029W 1131 nt3.87□□□□□ -1.79
UFD1P53044 YBR141W-AYBR141W-A 96 nt3.87□□□□□ -1.79
UFD1P53044 SWC3YAL011W 1878 nt3.87□□□□□ -1.79
UFD1P53044 PEP5YMR231W 3090 nt3.87□□□□□ -1.79
UFD1P53044 NUP133YKR082W 3474 nt3.87□□□□□ -1.79
UFD1P53044 HMG1YML075C 3165 nt3.87□□□□□ -1.79
UFD1P53044 YHR177WYHR177W 1362 nt3.87□□□□□ -1.79
UFD1P53044 SMP1YBR182C 1359 nt3.87□□□□□ -1.79
UFD1P53044 SPO77YLR341W 1434 nt3.87□□□□□ -1.79
UFD1P53044 MSC2YDR205W 2175 nt3.86□□□□□ -1.79
UFD1P53044 MAD3YJL013C 1548 nt3.86□□□□□ -1.79
UFD1P53044 YND1YER005W 1893 nt3.86□□□□□ -1.79
UFD1P53044 NMD3YHR170W 1557 nt3.86□□□□□ -1.79
UFD1P53044 YPK9YOR291W 4419 nt3.86□□□□□ -1.79
UFD1P53044 ALG6YOR002W 1635 nt3.86□□□□□ -1.79
UFD1P53044 YIL028WYIL028W 399 nt3.86□□□□□ -1.79
UFD1P53044 COA3YJL062W-A 258 nt3.86□□□□□ -1.79
UFD1P53044 RAD27YKL113C 1149 nt3.86□□□□□ -1.79
UFD1P53044 UBI4YLL039C 1146 nt3.86□□□□□ -1.79
UFD1P53044 YLR125WYLR125W 411 nt3.86□□□□□ -1.79
UFD1P53044 snR3snR3 194 nt3.86□□□□□ -1.79
UFD1P53044 PMC1YGL006W 3522 nt3.86□□□□□ -1.79
UFD1P53044 ATM1YMR301C 2073 nt3.86□□□□□ -1.79
UFD1P53044 VHS3YOR054C 2025 nt3.85□□□□□ -1.79
UFD1P53044 ULS1YOR191W 4860 nt3.85□□□□□ -1.79
UFD1P53044 HCM1YCR065W 1695 nt3.85□□□□□ -1.79
UFD1P53044 SPT23YKL020C 3249 nt3.85□□□□□ -1.79
UFD1P53044 VID28YIL017C 2766 nt3.85□□□□□ -1.79
UFD1P53044 GIP4YAL031C 2283 nt3.85□□□□□ -1.79
UFD1P53044 YDL012CYDL012C 324 nt3.85□□□□□ -1.79
UFD1P53044 MHO1YJR008W 1017 nt3.85□□□□□ -1.79
UFD1P53044 YOR289WYOR289W 756 nt3.85□□□□□ -1.79
UFD1P53044 RTC1YOL138C 4026 nt3.85□□□□□ -1.79
UFD1P53044 MAG2YLR427W 2013 nt3.85□□□□□ -1.79
UFD1P53044 GAD1YMR250W 1758 nt3.84□□□□□ -1.79
UFD1P53044 NTR2YKR022C 969 nt3.84□□□□□ -1.79
UFD1P53044 YKR104WYKR104W 921 nt3.84□□□□□ -1.79
UFD1P53044 YMR082CYMR082C 357 nt3.84□□□□□ -1.79
UFD1P53044 ROT1YMR200W 771 nt3.84□□□□□ -1.79
UFD1P53044 UBA3YPR066W 900 nt3.84□□□□□ -1.79
UFD1P53044 IMD2YHR216W 1572 nt3.84□□□□□ -1.8
UFD1P53044 FPK1YNR047W 2682 nt3.84□□□□□ -1.8
UFD1P53044 UPC2YDR213W 2742 nt3.84□□□□□ -1.8
UFD1P53044 IXR1YKL032C 1794 nt3.84□□□□□ -1.8
UFD1P53044 IFM1YOL023W 2031 nt3.83□□□□□ -1.8
UFD1P53044 PMT5YDL093W 2232 nt3.83□□□□□ -1.8
UFD1P53044 CYM1YDR430C 2970 nt3.83□□□□□ -1.8
UFD1P53044 YDR445CYDR445C 408 nt3.83□□□□□ -1.8
UFD1P53044 AAD10YJR155W 867 nt3.83□□□□□ -1.8
UFD1P53044 DXO1YDR370C 1329 nt3.83□□□□□ -1.8
UFD1P53044 YCR023CYCR023C 1836 nt3.83□□□□□ -1.8
UFD1P53044 GRS2YPR081C 1857 nt3.83□□□□□ -1.8
UFD1P53044 OAF1YAL051W 3144 nt3.82□□□□□ -1.8
UFD1P53044 HOYDL227C 1761 nt3.82□□□□□ -1.8
UFD1P53044 IMG2YCR071C 441 nt3.82□□□□□ -1.8
UFD1P53044 YER134CYER134C 537 nt3.82□□□□□ -1.8
UFD1P53044 SKI8YGL213C 1194 nt3.82□□□□□ -1.8
UFD1P53044 BIO2YGR286C 1128 nt3.82□□□□□ -1.8
UFD1P53044 tS(AGA)D3tS(AGA)D3 83 nt3.82□□□□□ -1.8
UFD1P53044 GVP36YIL041W 981 nt3.82□□□□□ -1.8
UFD1P53044 UIP3YAR027W 708 nt3.82□□□□□ -1.8
UFD1P53044 ORM2YLR350W 651 nt3.82□□□□□ -1.8
UFD1P53044 RCL1YOL010W 1104 nt3.82□□□□□ -1.8
UFD1P53044 YPL025CYPL025C 558 nt3.82□□□□□ -1.8
UFD1P53044 SPO19YPL130W 672 nt3.82□□□□□ -1.8
UFD1P53044 PIM1YBL022C 3402 nt3.82□□□□□ -1.8
UFD1P53044 RSC3YDR303C 2658 nt3.81□□□□□ -1.8
UFD1P53044 PEX30YLR324W 1572 nt3.81□□□□□ -1.8
UFD1P53044 MCM2YBL023C 2607 nt3.81□□□□□ -1.8
UFD1P53044 INO2YDR123C 915 nt3.81□□□□□ -1.8
UFD1P53044 MMS2YGL087C 414 nt3.81□□□□□ -1.8
UFD1P53044 YLF2YHL014C 1218 nt3.81□□□□□ -1.8
UFD1P53044 MAD2YJL030W 591 nt3.81□□□□□ -1.8
UFD1P53044 YKL169CYKL169C 384 nt3.81□□□□□ -1.8
UFD1P53044 RPP0YLR340W 939 nt3.81□□□□□ -1.8
UFD1P53044 YMR130WYMR130W 909 nt3.81□□□□□ -1.8
UFD1P53044 HMT1YBR034C 1047 nt3.81□□□□□ -1.8
UFD1P53044 ARR1YPR199C 885 nt3.81□□□□□ -1.8
UFD1P53044 SKM1YOL113W 1968 nt3.81□□□□□ -1.8
UFD1P53044 ATG32YIL146C 1590 nt3.8□□□□□ -1.8
UFD1P53044 NOP58YOR310C 1536 nt3.8□□□□□ -1.8
UFD1P53044 YBR139WYBR139W 1527 nt3.8□□□□□ -1.8
UFD1P53044 ECM22YLR228C 2445 nt3.8□□□□□ -1.8
UFD1P53044 YDR056CYDR056C 618 nt3.8□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms