Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RAB28P51157 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.67■■□□□ 1.06
RAB28P51157 DUX4L4-201ENST00000566884 1269 ntBASIC21.67■■□□□ 1.06
RAB28P51157 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.67■■□□□ 1.06
RAB28P51157 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.67■■□□□ 1.06
RAB28P51157 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.67■■□□□ 1.06
RAB28P51157 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB28P51157 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.66■■□□□ 1.06
RAB28P51157 SYT6-210ENST00000641643 1587 ntBASIC21.66■■□□□ 1.06
RAB28P51157 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB28P51157 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.66■■□□□ 1.06
RAB28P51157 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC21.66■■□□□ 1.06
RAB28P51157 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.66■■□□□ 1.06
RAB28P51157 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAB28P51157 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RAB28P51157 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RAB28P51157 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.65■■□□□ 1.06
RAB28P51157 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB28P51157 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAB28P51157 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.65■■□□□ 1.06
RAB28P51157 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB28P51157 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC21.65■■□□□ 1.06
RAB28P51157 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB28P51157 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.65■■□□□ 1.06
RAB28P51157 AC006455.2-201ENST00000429931 906 ntBASIC21.65■■□□□ 1.06
RAB28P51157 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.65■■□□□ 1.06
RAB28P51157 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.65■■□□□ 1.06
RAB28P51157 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB28P51157 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RAB28P51157 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RAB28P51157 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.65■■□□□ 1.06
RAB28P51157 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.64■■□□□ 1.06
RAB28P51157 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RAB28P51157 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC21.64■■□□□ 1.06
RAB28P51157 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB28P51157 AC096631.2-201ENST00000436136 790 ntBASIC21.64■■□□□ 1.05
RAB28P51157 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.64■■□□□ 1.05
RAB28P51157 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.64■■□□□ 1.05
RAB28P51157 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
RAB28P51157 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB28P51157 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RAB28P51157 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.64■■□□□ 1.05
RAB28P51157 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
RAB28P51157 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.63■■□□□ 1.05
RAB28P51157 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB28P51157 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB28P51157 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.63■■□□□ 1.05
RAB28P51157 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.63■■□□□ 1.05
RAB28P51157 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC21.63■■□□□ 1.05
RAB28P51157 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB28P51157 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.63■■□□□ 1.05
RAB28P51157 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
RAB28P51157 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
RAB28P51157 AL353803.4-201ENST00000565882 1934 ntBASIC21.63■■□□□ 1.05
RAB28P51157 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RAB28P51157 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
RAB28P51157 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB28P51157 UNC93B3-201ENST00000308076 687 ntBASIC21.62■■□□□ 1.05
RAB28P51157 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.62■■□□□ 1.05
RAB28P51157 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.62■■□□□ 1.05
RAB28P51157 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RAB28P51157 AL138724.1-201ENST00000606771 1088 ntBASIC21.62■■□□□ 1.05
RAB28P51157 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.62■■□□□ 1.05
RAB28P51157 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB28P51157 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB28P51157 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC21.62■■□□□ 1.05
RAB28P51157 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB28P51157 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RAB28P51157 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
RAB28P51157 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.61■■□□□ 1.05
RAB28P51157 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB28P51157 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB28P51157 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.61■■□□□ 1.05
RAB28P51157 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
RAB28P51157 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.61■■□□□ 1.05
RAB28P51157 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB28P51157 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RAB28P51157 SERBP1P1-201ENST00000396021 1160 ntBASIC21.61■■□□□ 1.05
RAB28P51157 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.61■■□□□ 1.05
RAB28P51157 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC21.61■■□□□ 1.05
RAB28P51157 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB28P51157 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB28P51157 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
RAB28P51157 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.61■■□□□ 1.05
RAB28P51157 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB28P51157 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB28P51157 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB28P51157 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RAB28P51157 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAB28P51157 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RAB28P51157 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
RAB28P51157 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.6■■□□□ 1.05
RAB28P51157 pRNA.6-201ENST00000610482 90 ntBASIC21.6■■□□□ 1.05
RAB28P51157 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
RAB28P51157 pRNA.5-201ENST00000612139 90 ntBASIC21.6■■□□□ 1.05
RAB28P51157 pRNA.11-201ENST00000618423 90 ntBASIC21.6■■□□□ 1.05
RAB28P51157 pRNA.13-201ENST00000619112 90 ntBASIC21.6■■□□□ 1.05
RAB28P51157 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
RAB28P51157 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.6■■□□□ 1.05
RAB28P51157 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms