Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
CDC34P49427 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDC34P49427 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CDC34P49427 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDC34P49427 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CDC34P49427 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC34P49427 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDC34P49427 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC34P49427 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CDC34P49427 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CDC34P49427 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC34P49427 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.64■□□□□ 0.41
CDC34P49427 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.64■□□□□ 0.41
CDC34P49427 AC092296.2-201ENST00000589470 999 ntBASIC17.64■□□□□ 0.41
CDC34P49427 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDC34P49427 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
CDC34P49427 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDC34P49427 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.64■□□□□ 0.41
CDC34P49427 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.63■□□□□ 0.41
CDC34P49427 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
CDC34P49427 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC34P49427 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC34P49427 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC34P49427 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDC34P49427 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.63■□□□□ 0.41
CDC34P49427 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
CDC34P49427 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDC34P49427 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.63■□□□□ 0.41
CDC34P49427 AC092053.2-201ENST00000640557 1818 ntBASIC17.63■□□□□ 0.41
CDC34P49427 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDC34P49427 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDC34P49427 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDC34P49427 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDC34P49427 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDC34P49427 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDC34P49427 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDC34P49427 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDC34P49427 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.62■□□□□ 0.41
CDC34P49427 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDC34P49427 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDC34P49427 C11orf96-202ENST00000528572 1834 ntBASIC17.62■□□□□ 0.41
CDC34P49427 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDC34P49427 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDC34P49427 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDC34P49427 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDC34P49427 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDC34P49427 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDC34P49427 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDC34P49427 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.61■□□□□ 0.41
CDC34P49427 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC17.61■□□□□ 0.41
CDC34P49427 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDC34P49427 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDC34P49427 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDC34P49427 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.61■□□□□ 0.41
CDC34P49427 ECEL1P2-201ENST00000461596 1295 ntBASIC17.61■□□□□ 0.41
CDC34P49427 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.61■□□□□ 0.41
CDC34P49427 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDC34P49427 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDC34P49427 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDC34P49427 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CDC34P49427 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CDC34P49427 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDC34P49427 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDC34P49427 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.61■□□□□ 0.41
CDC34P49427 AL022069.1-201ENST00000568025 1636 ntBASIC17.61■□□□□ 0.41
CDC34P49427 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.61■□□□□ 0.41
CDC34P49427 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDC34P49427 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDC34P49427 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDC34P49427 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDC34P49427 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDC34P49427 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.6■□□□□ 0.41
CDC34P49427 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.6■□□□□ 0.41
CDC34P49427 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.6■□□□□ 0.41
CDC34P49427 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.6■□□□□ 0.41
CDC34P49427 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDC34P49427 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDC34P49427 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDC34P49427 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDC34P49427 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC17.6■□□□□ 0.41
CDC34P49427 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDC34P49427 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CDC34P49427 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CDC34P49427 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC17.59■□□□□ 0.41
CDC34P49427 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDC34P49427 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDC34P49427 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDC34P49427 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CDC34P49427 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC17.59■□□□□ 0.41
CDC34P49427 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CDC34P49427 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDC34P49427 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDC34P49427 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CDC34P49427 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC34P49427 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC34P49427 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC34P49427 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC34P49427 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CDC34P49427 MIR3648-2-201ENST00000581792 180 ntBASIC17.58■□□□□ 0.4
CDC34P49427 MIR3648-1-201ENST00000615959 180 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms