Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3AP46098 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3AP46098 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3AP46098 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3AP46098 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3AP46098 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3AP46098 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
HTR3AP46098 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
HTR3AP46098 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HTR3AP46098 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.59■□□□□ 0.89
HTR3AP46098 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
HTR3AP46098 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
HTR3AP46098 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTR3AP46098 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTR3AP46098 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTR3AP46098 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HTR3AP46098 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTR3AP46098 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTR3AP46098 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.59■□□□□ 0.89
HTR3AP46098 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
HTR3AP46098 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.59■□□□□ 0.89
HTR3AP46098 MTDHP2-201ENST00000601468 714 ntBASIC20.59■□□□□ 0.89
HTR3AP46098 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HTR3AP46098 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HTR3AP46098 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HTR3AP46098 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HTR3AP46098 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
HTR3AP46098 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HTR3AP46098 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
HTR3AP46098 AC005703.6-201ENST00000623265 1329 ntBASIC20.58■□□□□ 0.89
HTR3AP46098 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HTR3AP46098 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HTR3AP46098 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HTR3AP46098 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.58■□□□□ 0.89
HTR3AP46098 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HTR3AP46098 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
HTR3AP46098 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.58■□□□□ 0.89
HTR3AP46098 AL035685.1-201ENST00000636663 812 ntBASIC20.58■□□□□ 0.89
HTR3AP46098 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
HTR3AP46098 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
HTR3AP46098 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR3AP46098 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.57■□□□□ 0.88
HTR3AP46098 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR3AP46098 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HTR3AP46098 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.57■□□□□ 0.88
HTR3AP46098 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.57■□□□□ 0.88
HTR3AP46098 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR3AP46098 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR3AP46098 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR3AP46098 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR3AP46098 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HTR3AP46098 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HTR3AP46098 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR3AP46098 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HTR3AP46098 EP400NL-214ENST00000641289 2402 ntBASIC20.56■□□□□ 0.88
HTR3AP46098 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR3AP46098 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR3AP46098 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HTR3AP46098 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.56■□□□□ 0.88
HTR3AP46098 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HTR3AP46098 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR3AP46098 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HTR3AP46098 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.55■□□□□ 0.88
HTR3AP46098 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
HTR3AP46098 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.55■□□□□ 0.88
HTR3AP46098 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR3AP46098 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HTR3AP46098 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.55■□□□□ 0.88
HTR3AP46098 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HTR3AP46098 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HTR3AP46098 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR3AP46098 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HTR3AP46098 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HTR3AP46098 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HTR3AP46098 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR3AP46098 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HTR3AP46098 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR3AP46098 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.54■□□□□ 0.88
HTR3AP46098 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR3AP46098 AC010997.5-201ENST00000609182 354 ntBASIC20.54■□□□□ 0.88
HTR3AP46098 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.54■□□□□ 0.88
HTR3AP46098 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HTR3AP46098 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HTR3AP46098 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.54■□□□□ 0.88
HTR3AP46098 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HTR3AP46098 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HTR3AP46098 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR3AP46098 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HTR3AP46098 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HTR3AP46098 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.53■□□□□ 0.88
HTR3AP46098 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
HTR3AP46098 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HTR3AP46098 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR3AP46098 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.53■□□□□ 0.88
HTR3AP46098 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.53■□□□□ 0.88
HTR3AP46098 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HTR3AP46098 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.53■□□□□ 0.88
HTR3AP46098 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HTR3AP46098 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HTR3AP46098 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms