Protein–RNA interactions for Protein: P35542

SAA4, Serum amyloid A-4 protein, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA4P35542 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SAA4P35542 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SAA4P35542 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAA4P35542 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAA4P35542 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAA4P35542 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SAA4P35542 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SAA4P35542 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.14■□□□□ 0.49
SAA4P35542 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.14■□□□□ 0.49
SAA4P35542 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SAA4P35542 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAA4P35542 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SAA4P35542 FP325331.1-202ENST00000623531 1380 ntBASIC18.14■□□□□ 0.49
SAA4P35542 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SAA4P35542 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.13■□□□□ 0.49
SAA4P35542 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
SAA4P35542 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SAA4P35542 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SAA4P35542 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SAA4P35542 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.13■□□□□ 0.49
SAA4P35542 SUDS3P1-201ENST00000505831 966 ntBASIC18.13■□□□□ 0.49
SAA4P35542 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.13■□□□□ 0.49
SAA4P35542 AF213884.3-201ENST00000563833 479 ntBASIC18.13■□□□□ 0.49
SAA4P35542 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SAA4P35542 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SAA4P35542 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
SAA4P35542 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SAA4P35542 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SAA4P35542 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SAA4P35542 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SAA4P35542 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.12■□□□□ 0.49
SAA4P35542 AP001330.3-201ENST00000520123 633 ntBASIC18.12■□□□□ 0.49
SAA4P35542 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.12■□□□□ 0.49
SAA4P35542 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.12■□□□□ 0.49
SAA4P35542 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.12■□□□□ 0.49
SAA4P35542 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SAA4P35542 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.12■□□□□ 0.49
SAA4P35542 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SAA4P35542 LINC01529-204ENST00000636474 1715 ntBASIC18.12■□□□□ 0.49
SAA4P35542 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.12■□□□□ 0.49
SAA4P35542 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SAA4P35542 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SAA4P35542 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
SAA4P35542 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SAA4P35542 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SAA4P35542 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SAA4P35542 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SAA4P35542 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SAA4P35542 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SAA4P35542 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SAA4P35542 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SAA4P35542 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
SAA4P35542 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SAA4P35542 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.11■□□□□ 0.49
SAA4P35542 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
SAA4P35542 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SAA4P35542 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SAA4P35542 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SAA4P35542 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC18.1■□□□□ 0.49
SAA4P35542 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.1■□□□□ 0.49
SAA4P35542 MIR939-201ENST00000401314 82 ntBASIC18.1■□□□□ 0.49
SAA4P35542 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.1■□□□□ 0.49
SAA4P35542 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.1■□□□□ 0.49
SAA4P35542 DUX4L4-201ENST00000566884 1269 ntBASIC18.1■□□□□ 0.49
SAA4P35542 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SAA4P35542 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SAA4P35542 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SAA4P35542 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SAA4P35542 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SAA4P35542 AC079630.1-202ENST00000618127 1840 ntBASIC18.09■□□□□ 0.49
SAA4P35542 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC18.09■□□□□ 0.49
SAA4P35542 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SAA4P35542 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SAA4P35542 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SAA4P35542 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.09■□□□□ 0.49
SAA4P35542 AC091305.1-201ENST00000479476 895 ntBASIC18.09■□□□□ 0.49
SAA4P35542 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SAA4P35542 AC027682.1-201ENST00000562846 899 ntBASIC18.09■□□□□ 0.49
SAA4P35542 AL136967.2-201ENST00000623968 743 ntBASIC18.09■□□□□ 0.49
SAA4P35542 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SAA4P35542 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SAA4P35542 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SAA4P35542 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC18.09■□□□□ 0.49
SAA4P35542 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
SAA4P35542 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.08■□□□□ 0.49
SAA4P35542 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SAA4P35542 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SAA4P35542 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SAA4P35542 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SAA4P35542 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
SAA4P35542 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC18.08■□□□□ 0.48
SAA4P35542 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SAA4P35542 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.08■□□□□ 0.48
SAA4P35542 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.08■□□□□ 0.48
SAA4P35542 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.08■□□□□ 0.48
SAA4P35542 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.08■□□□□ 0.48
SAA4P35542 AC008764.7-201ENST00000593779 1081 ntBASIC18.08■□□□□ 0.48
SAA4P35542 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SAA4P35542 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
SAA4P35542 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms