Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC16.44■□□□□ 0.22
CKS2P33552 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.44■□□□□ 0.22
CKS2P33552 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC16.44■□□□□ 0.22
CKS2P33552 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKS2P33552 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKS2P33552 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKS2P33552 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC16.44■□□□□ 0.22
CKS2P33552 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CKS2P33552 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKS2P33552 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKS2P33552 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CKS2P33552 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC16.44■□□□□ 0.22
CKS2P33552 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKS2P33552 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKS2P33552 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKS2P33552 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKS2P33552 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CKS2P33552 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.43■□□□□ 0.22
CKS2P33552 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CKS2P33552 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CKS2P33552 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKS2P33552 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CKS2P33552 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CKS2P33552 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.43■□□□□ 0.22
CKS2P33552 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKS2P33552 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CKS2P33552 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC16.43■□□□□ 0.22
CKS2P33552 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC16.43■□□□□ 0.22
CKS2P33552 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CKS2P33552 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CKS2P33552 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC16.43■□□□□ 0.22
CKS2P33552 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.43■□□□□ 0.22
CKS2P33552 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKS2P33552 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
CKS2P33552 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.43■□□□□ 0.22
CKS2P33552 GCA-201ENST00000233612 1694 ntTSL 2 BASIC16.43■□□□□ 0.22
CKS2P33552 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKS2P33552 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CKS2P33552 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKS2P33552 SMPD5-203ENST00000639008 1464 ntBASIC16.42■□□□□ 0.22
CKS2P33552 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKS2P33552 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC16.42■□□□□ 0.22
CKS2P33552 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16.42■□□□□ 0.22
CKS2P33552 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKS2P33552 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKS2P33552 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CKS2P33552 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CKS2P33552 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
CKS2P33552 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.42■□□□□ 0.22
CKS2P33552 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
CKS2P33552 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CKS2P33552 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.42■□□□□ 0.22
CKS2P33552 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CKS2P33552 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKS2P33552 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CKS2P33552 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKS2P33552 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKS2P33552 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CKS2P33552 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKS2P33552 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKS2P33552 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC16.41■□□□□ 0.22
CKS2P33552 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKS2P33552 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKS2P33552 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKS2P33552 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKS2P33552 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CKS2P33552 H19-210ENST00000439725 1929 ntTSL 2 BASIC16.41■□□□□ 0.22
CKS2P33552 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKS2P33552 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CKS2P33552 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKS2P33552 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKS2P33552 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC16.4■□□□□ 0.22
CKS2P33552 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKS2P33552 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKS2P33552 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CKS2P33552 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CKS2P33552 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CKS2P33552 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKS2P33552 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.4■□□□□ 0.22
CKS2P33552 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CKS2P33552 AL157400.5-201ENST00000507624 621 ntBASIC16.4■□□□□ 0.22
CKS2P33552 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CKS2P33552 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKS2P33552 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKS2P33552 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC16.4■□□□□ 0.22
CKS2P33552 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CKS2P33552 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CKS2P33552 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CKS2P33552 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKS2P33552 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKS2P33552 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKS2P33552 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKS2P33552 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKS2P33552 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKS2P33552 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKS2P33552 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKS2P33552 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKS2P33552 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CKS2P33552 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKS2P33552 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms