Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
VARSP26640 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC21.92■■□□□ 1.1
VARSP26640 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC21.92■■□□□ 1.1
VARSP26640 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC21.92■■□□□ 1.1
VARSP26640 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VARSP26640 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
VARSP26640 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
VARSP26640 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.92■■□□□ 1.1
VARSP26640 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.92■■□□□ 1.1
VARSP26640 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
VARSP26640 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VARSP26640 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.91■■□□□ 1.1
VARSP26640 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
VARSP26640 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VARSP26640 AC092028.1-203ENST00000608262 953 ntBASIC21.91■■□□□ 1.1
VARSP26640 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
VARSP26640 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.91■■□□□ 1.1
VARSP26640 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.91■■□□□ 1.1
VARSP26640 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VARSP26640 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VARSP26640 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
VARSP26640 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
VARSP26640 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
VARSP26640 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
VARSP26640 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
VARSP26640 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.9■■□□□ 1.1
VARSP26640 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.9■■□□□ 1.1
VARSP26640 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.9■■□□□ 1.1
VARSP26640 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
VARSP26640 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.9■■□□□ 1.1
VARSP26640 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
VARSP26640 UNC93B8-201ENST00000511903 705 ntBASIC21.9■■□□□ 1.1
VARSP26640 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
VARSP26640 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VARSP26640 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
VARSP26640 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.9■■□□□ 1.1
VARSP26640 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
VARSP26640 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
VARSP26640 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
VARSP26640 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.89■■□□□ 1.09
VARSP26640 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.89■■□□□ 1.09
VARSP26640 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.89■■□□□ 1.09
VARSP26640 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
VARSP26640 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
VARSP26640 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
VARSP26640 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.89■■□□□ 1.09
VARSP26640 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.89■■□□□ 1.09
VARSP26640 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VARSP26640 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
VARSP26640 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
VARSP26640 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
VARSP26640 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.88■■□□□ 1.09
VARSP26640 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.88■■□□□ 1.09
VARSP26640 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
VARSP26640 AL139246.5-201ENST00000606645 996 ntBASIC21.88■■□□□ 1.09
VARSP26640 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VARSP26640 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VARSP26640 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VARSP26640 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.87■■□□□ 1.09
VARSP26640 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.87■■□□□ 1.09
VARSP26640 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VARSP26640 ANOS2P-203ENST00000472227 1816 ntBASIC21.87■■□□□ 1.09
VARSP26640 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VARSP26640 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
VARSP26640 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.87■■□□□ 1.09
VARSP26640 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.87■■□□□ 1.09
VARSP26640 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.87■■□□□ 1.09
VARSP26640 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
VARSP26640 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VARSP26640 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.86■■□□□ 1.09
VARSP26640 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.86■■□□□ 1.09
VARSP26640 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.86■■□□□ 1.09
VARSP26640 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VARSP26640 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.86■■□□□ 1.09
VARSP26640 MIR638-201ENST00000385237 100 ntBASIC21.86■■□□□ 1.09
VARSP26640 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.86■■□□□ 1.09
VARSP26640 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.86■■□□□ 1.09
VARSP26640 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VARSP26640 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
VARSP26640 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.86■■□□□ 1.09
VARSP26640 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
VARSP26640 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.86■■□□□ 1.09
VARSP26640 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VARSP26640 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VARSP26640 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VARSP26640 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VARSP26640 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
VARSP26640 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VARSP26640 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
VARSP26640 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.85■■□□□ 1.09
VARSP26640 TSPY9P-201ENST00000440215 945 ntBASIC21.85■■□□□ 1.09
VARSP26640 TSPY11P-201ENST00000442607 1045 ntBASIC21.85■■□□□ 1.09
VARSP26640 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
VARSP26640 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.85■■□□□ 1.09
VARSP26640 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.85■■□□□ 1.09
VARSP26640 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
VARSP26640 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VARSP26640 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
VARSP26640 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VARSP26640 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms