Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.76■□□□□ 0.75
MSR1P21757 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
MSR1P21757 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MSR1P21757 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.76■□□□□ 0.75
MSR1P21757 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MSR1P21757 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
MSR1P21757 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
MSR1P21757 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MSR1P21757 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
MSR1P21757 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.75■□□□□ 0.75
MSR1P21757 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MSR1P21757 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.75■□□□□ 0.75
MSR1P21757 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MSR1P21757 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MSR1P21757 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
MSR1P21757 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MSR1P21757 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MSR1P21757 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.74■□□□□ 0.75
MSR1P21757 UNC93B8-201ENST00000511903 705 ntBASIC19.74■□□□□ 0.75
MSR1P21757 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MSR1P21757 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
MSR1P21757 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MSR1P21757 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MSR1P21757 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
MSR1P21757 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MSR1P21757 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.73■□□□□ 0.75
MSR1P21757 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MSR1P21757 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.73■□□□□ 0.75
MSR1P21757 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MSR1P21757 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MSR1P21757 AC144652.1-201ENST00000609974 1624 ntBASIC19.73■□□□□ 0.75
MSR1P21757 AC012676.1-201ENST00000574705 1949 ntBASIC19.72■□□□□ 0.75
MSR1P21757 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.72■□□□□ 0.75
MSR1P21757 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MSR1P21757 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MSR1P21757 C9orf163-202ENST00000624034 2573 ntBASIC19.72■□□□□ 0.75
MSR1P21757 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MSR1P21757 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MSR1P21757 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
MSR1P21757 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
MSR1P21757 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC19.72■□□□□ 0.75
MSR1P21757 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.72■□□□□ 0.75
MSR1P21757 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.72■□□□□ 0.75
MSR1P21757 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
MSR1P21757 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
MSR1P21757 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.72■□□□□ 0.75
MSR1P21757 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MSR1P21757 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.72■□□□□ 0.75
MSR1P21757 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.72■□□□□ 0.75
MSR1P21757 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MSR1P21757 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.72■□□□□ 0.75
MSR1P21757 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MSR1P21757 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MSR1P21757 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MSR1P21757 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.71■□□□□ 0.75
MSR1P21757 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.71■□□□□ 0.75
MSR1P21757 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
MSR1P21757 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MSR1P21757 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
MSR1P21757 MIR6724-1-201ENST00000616420 92 ntBASIC19.71■□□□□ 0.75
MSR1P21757 MIR6724-2-201ENST00000616483 92 ntBASIC19.71■□□□□ 0.75
MSR1P21757 MIR6724-4-201ENST00000617390 92 ntBASIC19.71■□□□□ 0.75
MSR1P21757 MIR6724-3-201ENST00000622482 92 ntBASIC19.71■□□□□ 0.75
MSR1P21757 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
MSR1P21757 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.71■□□□□ 0.75
MSR1P21757 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
MSR1P21757 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
MSR1P21757 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
MSR1P21757 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.74
MSR1P21757 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSR1P21757 AL353803.4-201ENST00000565882 1934 ntBASIC19.7■□□□□ 0.74
MSR1P21757 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
MSR1P21757 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
MSR1P21757 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.7■□□□□ 0.74
MSR1P21757 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
MSR1P21757 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
MSR1P21757 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
MSR1P21757 KRT16P3-201ENST00000439127 1283 ntBASIC19.7■□□□□ 0.74
MSR1P21757 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
MSR1P21757 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.7■□□□□ 0.74
MSR1P21757 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
MSR1P21757 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.7■□□□□ 0.74
MSR1P21757 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MSR1P21757 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
MSR1P21757 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MSR1P21757 GUSBP5-201ENST00000418136 578 ntBASIC19.69■□□□□ 0.74
MSR1P21757 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
MSR1P21757 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSR1P21757 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSR1P21757 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.69■□□□□ 0.74
MSR1P21757 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSR1P21757 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSR1P21757 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSR1P21757 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSR1P21757 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
MSR1P21757 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
MSR1P21757 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
MSR1P21757 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.68■□□□□ 0.74
MSR1P21757 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.68■□□□□ 0.74
MSR1P21757 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms