Protein–RNA interactions for Protein: P21580

TNFAIP3, Tumor necrosis factor alpha-induced protein 3, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3P21580 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TNFAIP3P21580 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.96■■□□□ 1.43
TNFAIP3P21580 AC021242.3-201ENST00000607598 1377 ntBASIC23.96■■□□□ 1.43
TNFAIP3P21580 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.96■■□□□ 1.43
TNFAIP3P21580 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC23.96■■□□□ 1.43
TNFAIP3P21580 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TNFAIP3P21580 BX664725.1-201ENST00000438252 379 ntBASIC23.96■■□□□ 1.43
TNFAIP3P21580 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TNFAIP3P21580 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.96■■□□□ 1.43
TNFAIP3P21580 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.96■■□□□ 1.43
TNFAIP3P21580 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC23.96■■□□□ 1.43
TNFAIP3P21580 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC23.96■■□□□ 1.43
TNFAIP3P21580 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.96■■□□□ 1.43
TNFAIP3P21580 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TNFAIP3P21580 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TNFAIP3P21580 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TNFAIP3P21580 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TNFAIP3P21580 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
TNFAIP3P21580 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TNFAIP3P21580 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
TNFAIP3P21580 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TNFAIP3P21580 AC079834.2-201ENST00000609776 1949 ntBASIC23.94■■□□□ 1.42
TNFAIP3P21580 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TNFAIP3P21580 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC23.94■■□□□ 1.42
TNFAIP3P21580 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TNFAIP3P21580 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TNFAIP3P21580 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
TNFAIP3P21580 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TNFAIP3P21580 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TNFAIP3P21580 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.94■■□□□ 1.42
TNFAIP3P21580 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.94■■□□□ 1.42
TNFAIP3P21580 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC23.94■■□□□ 1.42
TNFAIP3P21580 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
TNFAIP3P21580 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
TNFAIP3P21580 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TNFAIP3P21580 AL353803.4-201ENST00000565882 1934 ntBASIC23.93■■□□□ 1.42
TNFAIP3P21580 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
TNFAIP3P21580 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.93■■□□□ 1.42
TNFAIP3P21580 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC23.93■■□□□ 1.42
TNFAIP3P21580 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TNFAIP3P21580 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TNFAIP3P21580 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TNFAIP3P21580 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
TNFAIP3P21580 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.92■■□□□ 1.42
TNFAIP3P21580 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TNFAIP3P21580 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
TNFAIP3P21580 AL117328.2-201ENST00000624617 1940 ntBASIC23.92■■□□□ 1.42
TNFAIP3P21580 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TNFAIP3P21580 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
TNFAIP3P21580 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.92■■□□□ 1.42
TNFAIP3P21580 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
TNFAIP3P21580 MIR6722-201ENST00000617286 78 ntBASIC23.92■■□□□ 1.42
TNFAIP3P21580 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
TNFAIP3P21580 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.92■■□□□ 1.42
TNFAIP3P21580 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TNFAIP3P21580 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNFAIP3P21580 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNFAIP3P21580 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TNFAIP3P21580 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNFAIP3P21580 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
TNFAIP3P21580 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC23.91■■□□□ 1.42
TNFAIP3P21580 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNFAIP3P21580 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNFAIP3P21580 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
TNFAIP3P21580 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TNFAIP3P21580 AC005703.6-201ENST00000623265 1329 ntBASIC23.9■■□□□ 1.42
TNFAIP3P21580 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
TNFAIP3P21580 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
TNFAIP3P21580 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.9■■□□□ 1.42
TNFAIP3P21580 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.9■■□□□ 1.42
TNFAIP3P21580 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TNFAIP3P21580 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TNFAIP3P21580 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC23.89■■□□□ 1.42
TNFAIP3P21580 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.89■■□□□ 1.42
TNFAIP3P21580 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
TNFAIP3P21580 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
TNFAIP3P21580 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
TNFAIP3P21580 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.89■■□□□ 1.41
TNFAIP3P21580 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
TNFAIP3P21580 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.89■■□□□ 1.41
TNFAIP3P21580 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TNFAIP3P21580 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
TNFAIP3P21580 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.88■■□□□ 1.41
TNFAIP3P21580 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.88■■□□□ 1.41
TNFAIP3P21580 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC23.88■■□□□ 1.41
TNFAIP3P21580 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
TNFAIP3P21580 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TNFAIP3P21580 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
TNFAIP3P21580 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
TNFAIP3P21580 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
TNFAIP3P21580 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TNFAIP3P21580 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TNFAIP3P21580 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.86■■□□□ 1.41
TNFAIP3P21580 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
TNFAIP3P21580 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
TNFAIP3P21580 AC144652.1-201ENST00000609974 1624 ntBASIC23.86■■□□□ 1.41
TNFAIP3P21580 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
TNFAIP3P21580 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC23.86■■□□□ 1.41
TNFAIP3P21580 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TNFAIP3P21580 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms