Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
ATF3P18847 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC31.34■■■□□ 2.61
ATF3P18847 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
ATF3P18847 CD37-213ENST00000598095 1598 ntTSL 2 BASIC31.34■■■□□ 2.61
ATF3P18847 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC31.33■■■□□ 2.61
ATF3P18847 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ATF3P18847 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC31.33■■■□□ 2.61
ATF3P18847 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ATF3P18847 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC31.33■■■□□ 2.61
ATF3P18847 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC31.33■■■□□ 2.61
ATF3P18847 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC31.33■■■□□ 2.61
ATF3P18847 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ATF3P18847 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC31.33■■■□□ 2.61
ATF3P18847 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ATF3P18847 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC31.32■■■□□ 2.61
ATF3P18847 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
ATF3P18847 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC31.32■■■□□ 2.6
ATF3P18847 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ATF3P18847 NCF1B-203ENST00000435988 1254 ntBASIC31.32■■■□□ 2.6
ATF3P18847 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC31.32■■■□□ 2.6
ATF3P18847 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC31.32■■■□□ 2.6
ATF3P18847 AL499627.2-201ENST00000606283 725 ntBASIC31.32■■■□□ 2.6
ATF3P18847 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
ATF3P18847 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
ATF3P18847 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ATF3P18847 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
ATF3P18847 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC31.31■■■□□ 2.6
ATF3P18847 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
ATF3P18847 AL161729.1-201ENST00000604104 1402 ntBASIC31.31■■■□□ 2.6
ATF3P18847 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
ATF3P18847 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ATF3P18847 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ATF3P18847 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ATF3P18847 SHD-204ENST00000599689 1729 ntTSL 5 BASIC31.3■■■□□ 2.6
ATF3P18847 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC31.3■■■□□ 2.6
ATF3P18847 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC31.3■■■□□ 2.6
ATF3P18847 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
ATF3P18847 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC31.3■■■□□ 2.6
ATF3P18847 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC31.3■■■□□ 2.6
ATF3P18847 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ATF3P18847 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
ATF3P18847 COX20-201ENST00000366528 568 ntTSL 2 BASIC31.29■■■□□ 2.6
ATF3P18847 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ATF3P18847 CD99P1-205ENST00000527459 561 ntBASIC31.29■■■□□ 2.6
ATF3P18847 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ATF3P18847 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC31.29■■■□□ 2.6
ATF3P18847 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
ATF3P18847 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC31.28■■■□□ 2.6
ATF3P18847 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC31.28■■■□□ 2.6
ATF3P18847 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ATF3P18847 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
ATF3P18847 LSR-205ENST00000427250 1606 ntTSL 2 BASIC31.27■■■□□ 2.6
ATF3P18847 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC31.27■■■□□ 2.6
ATF3P18847 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ATF3P18847 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC31.27■■■□□ 2.6
ATF3P18847 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC31.27■■■□□ 2.6
ATF3P18847 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
ATF3P18847 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
ATF3P18847 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
ATF3P18847 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
ATF3P18847 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC31.27■■■□□ 2.6
ATF3P18847 AP004607.4-201ENST00000530158 1459 ntBASIC31.27■■■□□ 2.6
ATF3P18847 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.6
ATF3P18847 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC31.26■■■□□ 2.6
ATF3P18847 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC31.26■■■□□ 2.59
ATF3P18847 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
ATF3P18847 MFF-208ENST00000409616 1247 ntTSL 5 BASIC31.26■■■□□ 2.59
ATF3P18847 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC31.26■■■□□ 2.59
ATF3P18847 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC31.26■■■□□ 2.59
ATF3P18847 WWOX-218ENST00000627394 894 ntTSL 5 BASIC31.26■■■□□ 2.59
ATF3P18847 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.59
ATF3P18847 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC31.26■■■□□ 2.59
ATF3P18847 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC31.26■■■□□ 2.59
ATF3P18847 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC31.25■■■□□ 2.59
ATF3P18847 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC31.25■■■□□ 2.59
ATF3P18847 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC31.25■■■□□ 2.59
ATF3P18847 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
ATF3P18847 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC31.25■■■□□ 2.59
ATF3P18847 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
ATF3P18847 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
ATF3P18847 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
ATF3P18847 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC31.25■■■□□ 2.59
ATF3P18847 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ATF3P18847 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
ATF3P18847 METTL26-203ENST00000397664 604 ntTSL 2 BASIC31.24■■■□□ 2.59
ATF3P18847 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
ATF3P18847 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC31.24■■■□□ 2.59
ATF3P18847 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC31.24■■■□□ 2.59
ATF3P18847 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC31.24■■■□□ 2.59
ATF3P18847 AC004854.2-201ENST00000608450 1441 ntBASIC31.24■■■□□ 2.59
ATF3P18847 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC31.23■■■□□ 2.59
ATF3P18847 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC31.23■■■□□ 2.59
ATF3P18847 ALDH1A3-203ENST00000557963 1670 ntBASIC31.23■■■□□ 2.59
ATF3P18847 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC31.23■■■□□ 2.59
ATF3P18847 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
ATF3P18847 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC31.23■■■□□ 2.59
ATF3P18847 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.23■■■□□ 2.59
ATF3P18847 TSPY20P-201ENST00000450910 630 ntBASIC31.22■■■□□ 2.59
ATF3P18847 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
ATF3P18847 TPRG1LP1-201ENST00000598702 760 ntBASIC31.22■■■□□ 2.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms