Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PSMC3P17980 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PSMC3P17980 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
PSMC3P17980 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
PSMC3P17980 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PSMC3P17980 AC141586.4-201ENST00000624558 1573 ntBASIC23.33■■□□□ 1.33
PSMC3P17980 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
PSMC3P17980 AC034268.1-201ENST00000441047 882 ntBASIC23.33■■□□□ 1.33
PSMC3P17980 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.33■■□□□ 1.33
PSMC3P17980 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PSMC3P17980 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
PSMC3P17980 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PSMC3P17980 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PSMC3P17980 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC23.32■■□□□ 1.32
PSMC3P17980 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PSMC3P17980 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PSMC3P17980 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.32■■□□□ 1.32
PSMC3P17980 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
PSMC3P17980 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC23.31■■□□□ 1.32
PSMC3P17980 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
PSMC3P17980 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
PSMC3P17980 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PSMC3P17980 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC23.31■■□□□ 1.32
PSMC3P17980 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PSMC3P17980 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
PSMC3P17980 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PSMC3P17980 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
PSMC3P17980 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.31■■□□□ 1.32
PSMC3P17980 TSPY26P-201ENST00000476365 1326 ntBASIC23.31■■□□□ 1.32
PSMC3P17980 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.3■■□□□ 1.32
PSMC3P17980 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PSMC3P17980 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PSMC3P17980 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PSMC3P17980 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PSMC3P17980 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PSMC3P17980 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.3■■□□□ 1.32
PSMC3P17980 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC23.3■■□□□ 1.32
PSMC3P17980 AICDA-202ENST00000537228 667 ntTSL 5 BASIC23.3■■□□□ 1.32
PSMC3P17980 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC23.3■■□□□ 1.32
PSMC3P17980 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PSMC3P17980 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PSMC3P17980 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC23.3■■□□□ 1.32
PSMC3P17980 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
PSMC3P17980 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC23.3■■□□□ 1.32
PSMC3P17980 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC23.29■■□□□ 1.32
PSMC3P17980 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC23.29■■□□□ 1.32
PSMC3P17980 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.29■■□□□ 1.32
PSMC3P17980 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
PSMC3P17980 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
PSMC3P17980 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PSMC3P17980 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
PSMC3P17980 NME4-202ENST00000382940 766 ntTSL 3 BASIC23.29■■□□□ 1.32
PSMC3P17980 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.29■■□□□ 1.32
PSMC3P17980 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.29■■□□□ 1.32
PSMC3P17980 YBX1P1-201ENST00000445822 960 ntBASIC23.29■■□□□ 1.32
PSMC3P17980 SLC47A1P1-202ENST00000449666 945 ntBASIC23.29■■□□□ 1.32
PSMC3P17980 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.29■■□□□ 1.32
PSMC3P17980 NME4-211ENST00000620944 1193 ntTSL 2 BASIC23.29■■□□□ 1.32
PSMC3P17980 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.28■■□□□ 1.32
PSMC3P17980 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
PSMC3P17980 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PSMC3P17980 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PSMC3P17980 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
PSMC3P17980 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC23.28■■□□□ 1.32
PSMC3P17980 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PSMC3P17980 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.27■■□□□ 1.32
PSMC3P17980 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC23.27■■□□□ 1.32
PSMC3P17980 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC23.27■■□□□ 1.32
PSMC3P17980 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PSMC3P17980 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PSMC3P17980 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PSMC3P17980 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.26■■□□□ 1.31
PSMC3P17980 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PSMC3P17980 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
PSMC3P17980 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PSMC3P17980 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC23.26■■□□□ 1.31
PSMC3P17980 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC23.26■■□□□ 1.31
PSMC3P17980 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC23.26■■□□□ 1.31
PSMC3P17980 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.26■■□□□ 1.31
PSMC3P17980 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC23.26■■□□□ 1.31
PSMC3P17980 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
PSMC3P17980 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.26■■□□□ 1.31
PSMC3P17980 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
PSMC3P17980 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC23.26■■□□□ 1.31
PSMC3P17980 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PSMC3P17980 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PSMC3P17980 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC23.25■■□□□ 1.31
PSMC3P17980 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
PSMC3P17980 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC23.25■■□□□ 1.31
PSMC3P17980 AL358852.1-201ENST00000623174 1268 ntBASIC23.25■■□□□ 1.31
PSMC3P17980 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC23.25■■□□□ 1.31
PSMC3P17980 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
PSMC3P17980 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.25■■□□□ 1.31
PSMC3P17980 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.24■■□□□ 1.31
PSMC3P17980 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC23.24■■□□□ 1.31
PSMC3P17980 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.24■■□□□ 1.31
PSMC3P17980 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
PSMC3P17980 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC23.24■■□□□ 1.31
PSMC3P17980 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
PSMC3P17980 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC23.24■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms