Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
BMP4P12644 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
BMP4P12644 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
BMP4P12644 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
BMP4P12644 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
BMP4P12644 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
BMP4P12644 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BMP4P12644 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
BMP4P12644 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
BMP4P12644 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
BMP4P12644 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
BMP4P12644 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.39■□□□□ 0.86
BMP4P12644 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
BMP4P12644 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
BMP4P12644 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BMP4P12644 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BMP4P12644 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
BMP4P12644 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BMP4P12644 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
BMP4P12644 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC20.39■□□□□ 0.85
BMP4P12644 OR2A1-AS1-204ENST00000470435 602 ntBASIC20.39■□□□□ 0.85
BMP4P12644 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BMP4P12644 KRT125P-201ENST00000546827 989 ntBASIC20.39■□□□□ 0.85
BMP4P12644 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.39■□□□□ 0.85
BMP4P12644 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BMP4P12644 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.39■□□□□ 0.85
BMP4P12644 MIR6089-201ENST00000616698 64 ntBASIC20.39■□□□□ 0.85
BMP4P12644 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
BMP4P12644 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.39■□□□□ 0.85
BMP4P12644 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
BMP4P12644 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
BMP4P12644 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
BMP4P12644 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
BMP4P12644 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
BMP4P12644 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
BMP4P12644 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
BMP4P12644 BX664725.1-201ENST00000438252 379 ntBASIC20.38■□□□□ 0.85
BMP4P12644 THA1P-201ENST00000590384 1145 ntBASIC20.38■□□□□ 0.85
BMP4P12644 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
BMP4P12644 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
BMP4P12644 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
BMP4P12644 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
BMP4P12644 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BMP4P12644 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.37■□□□□ 0.85
BMP4P12644 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.37■□□□□ 0.85
BMP4P12644 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BMP4P12644 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
BMP4P12644 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BMP4P12644 KRT18P24-201ENST00000344739 1156 ntBASIC20.37■□□□□ 0.85
BMP4P12644 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BMP4P12644 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BMP4P12644 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BMP4P12644 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BMP4P12644 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BMP4P12644 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
BMP4P12644 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
BMP4P12644 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
BMP4P12644 ANOS2P-203ENST00000472227 1816 ntBASIC20.37■□□□□ 0.85
BMP4P12644 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
BMP4P12644 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.36■□□□□ 0.85
BMP4P12644 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BMP4P12644 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BMP4P12644 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.36■□□□□ 0.85
BMP4P12644 GUSBP5-201ENST00000418136 578 ntBASIC20.36■□□□□ 0.85
BMP4P12644 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.36■□□□□ 0.85
BMP4P12644 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.36■□□□□ 0.85
BMP4P12644 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
BMP4P12644 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BMP4P12644 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BMP4P12644 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
BMP4P12644 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BMP4P12644 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
BMP4P12644 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
BMP4P12644 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.35■□□□□ 0.85
BMP4P12644 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.35■□□□□ 0.85
BMP4P12644 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.35■□□□□ 0.85
BMP4P12644 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
BMP4P12644 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.35■□□□□ 0.85
BMP4P12644 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BMP4P12644 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BMP4P12644 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
BMP4P12644 AL592295.1-201ENST00000400984 884 ntBASIC20.35■□□□□ 0.85
BMP4P12644 AC239859.2-201ENST00000444165 318 ntBASIC20.35■□□□□ 0.85
BMP4P12644 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BMP4P12644 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
BMP4P12644 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BMP4P12644 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
BMP4P12644 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BMP4P12644 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BMP4P12644 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BMP4P12644 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
BMP4P12644 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
BMP4P12644 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.34■□□□□ 0.85
BMP4P12644 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BMP4P12644 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
BMP4P12644 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.34■□□□□ 0.85
BMP4P12644 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
BMP4P12644 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
BMP4P12644 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
BMP4P12644 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms