Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.28■■□□□ 1.32
CD48P09326 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.28■■□□□ 1.32
CD48P09326 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.28■■□□□ 1.32
CD48P09326 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.28■■□□□ 1.32
CD48P09326 CREM-229ENST00000474362 1030 ntTSL 2 BASIC23.28■■□□□ 1.32
CD48P09326 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC23.28■■□□□ 1.32
CD48P09326 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CD48P09326 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
CD48P09326 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CD48P09326 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CD48P09326 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
CD48P09326 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
CD48P09326 LSM4-201ENST00000252816 986 ntTSL 2 BASIC23.27■■□□□ 1.32
CD48P09326 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.27■■□□□ 1.32
CD48P09326 UNC93B8-201ENST00000511903 705 ntBASIC23.27■■□□□ 1.32
CD48P09326 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.27■■□□□ 1.32
CD48P09326 AC010997.5-201ENST00000609182 354 ntBASIC23.27■■□□□ 1.32
CD48P09326 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CD48P09326 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CD48P09326 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
CD48P09326 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
CD48P09326 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CD48P09326 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
CD48P09326 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
CD48P09326 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CD48P09326 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC23.26■■□□□ 1.31
CD48P09326 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
CD48P09326 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC23.26■■□□□ 1.31
CD48P09326 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.26■■□□□ 1.31
CD48P09326 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
CD48P09326 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CD48P09326 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CD48P09326 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CD48P09326 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CD48P09326 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CD48P09326 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CD48P09326 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
CD48P09326 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.25■■□□□ 1.31
CD48P09326 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
CD48P09326 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CD48P09326 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
CD48P09326 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
CD48P09326 EXOG-217ENST00000630638 197 ntTSL 5 BASIC23.24■■□□□ 1.31
CD48P09326 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
CD48P09326 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
CD48P09326 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
CD48P09326 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CD48P09326 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.23■■□□□ 1.31
CD48P09326 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CD48P09326 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CD48P09326 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC23.23■■□□□ 1.31
CD48P09326 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
CD48P09326 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.22■■□□□ 1.31
CD48P09326 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CD48P09326 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
CD48P09326 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
CD48P09326 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CD48P09326 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CD48P09326 AC144652.1-201ENST00000609974 1624 ntBASIC23.22■■□□□ 1.31
CD48P09326 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CD48P09326 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CD48P09326 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
CD48P09326 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC23.21■■□□□ 1.31
CD48P09326 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CD48P09326 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC23.21■■□□□ 1.31
CD48P09326 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CD48P09326 TERT-206ENST00000508104 2486 ntTSL 5 BASIC23.21■■□□□ 1.31
CD48P09326 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
CD48P09326 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CD48P09326 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.2■■□□□ 1.3
CD48P09326 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.2■■□□□ 1.3
CD48P09326 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CD48P09326 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CD48P09326 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.2■■□□□ 1.3
CD48P09326 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CD48P09326 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CD48P09326 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CD48P09326 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CD48P09326 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CD48P09326 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC23.19■■□□□ 1.3
CD48P09326 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC23.19■■□□□ 1.3
CD48P09326 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC23.19■■□□□ 1.3
CD48P09326 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CD48P09326 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CD48P09326 AC009102.2-201ENST00000606772 1639 ntBASIC23.19■■□□□ 1.3
CD48P09326 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CD48P09326 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CD48P09326 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CD48P09326 ASB1-202ENST00000409297 878 ntTSL 5 BASIC23.18■■□□□ 1.3
CD48P09326 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CD48P09326 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.18■■□□□ 1.3
CD48P09326 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CD48P09326 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC23.18■■□□□ 1.3
CD48P09326 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CD48P09326 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CD48P09326 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CD48P09326 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.17■■□□□ 1.3
CD48P09326 GUSBP5-201ENST00000418136 578 ntBASIC23.17■■□□□ 1.3
CD48P09326 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.17■■□□□ 1.3
CD48P09326 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms