Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LCATP04180 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.54■□□□□ 0.72
LCATP04180 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.54■□□□□ 0.72
LCATP04180 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.54■□□□□ 0.72
LCATP04180 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LCATP04180 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.53■□□□□ 0.72
LCATP04180 AC079630.1-202ENST00000618127 1840 ntBASIC19.53■□□□□ 0.72
LCATP04180 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LCATP04180 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LCATP04180 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.53■□□□□ 0.72
LCATP04180 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LCATP04180 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.53■□□□□ 0.72
LCATP04180 AC010997.5-201ENST00000609182 354 ntBASIC19.53■□□□□ 0.72
LCATP04180 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
LCATP04180 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
LCATP04180 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
LCATP04180 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LCATP04180 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC19.53■□□□□ 0.72
LCATP04180 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC19.53■□□□□ 0.72
LCATP04180 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
LCATP04180 DUSP8P3-201ENST00000399571 1760 ntBASIC19.52■□□□□ 0.72
LCATP04180 AC068473.5-201ENST00000616428 2072 ntBASIC19.52■□□□□ 0.72
LCATP04180 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
LCATP04180 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
LCATP04180 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.52■□□□□ 0.71
LCATP04180 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
LCATP04180 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
LCATP04180 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
LCATP04180 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LCATP04180 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LCATP04180 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LCATP04180 AC133561.1-201ENST00000568600 2415 ntBASIC19.51■□□□□ 0.71
LCATP04180 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LCATP04180 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LCATP04180 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
LCATP04180 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
LCATP04180 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
LCATP04180 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LCATP04180 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
LCATP04180 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
LCATP04180 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.51■□□□□ 0.71
LCATP04180 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.5■□□□□ 0.71
LCATP04180 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
LCATP04180 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LCATP04180 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
LCATP04180 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.5■□□□□ 0.71
LCATP04180 AL035685.1-201ENST00000636663 812 ntBASIC19.5■□□□□ 0.71
LCATP04180 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LCATP04180 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LCATP04180 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
LCATP04180 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.5■□□□□ 0.71
LCATP04180 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
LCATP04180 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC19.49■□□□□ 0.71
LCATP04180 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCATP04180 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCATP04180 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCATP04180 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
LCATP04180 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCATP04180 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.49■□□□□ 0.71
LCATP04180 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.49■□□□□ 0.71
LCATP04180 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
LCATP04180 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.49■□□□□ 0.71
LCATP04180 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCATP04180 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCATP04180 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCATP04180 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LCATP04180 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.48■□□□□ 0.71
LCATP04180 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LCATP04180 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LCATP04180 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LCATP04180 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
LCATP04180 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.48■□□□□ 0.71
LCATP04180 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LCATP04180 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.48■□□□□ 0.71
LCATP04180 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.48■□□□□ 0.71
LCATP04180 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LCATP04180 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
LCATP04180 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LCATP04180 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCATP04180 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.47■□□□□ 0.71
LCATP04180 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCATP04180 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LCATP04180 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCATP04180 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LCATP04180 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LCATP04180 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LCATP04180 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LCATP04180 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.47■□□□□ 0.71
LCATP04180 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.47■□□□□ 0.71
LCATP04180 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LCATP04180 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.46■□□□□ 0.71
LCATP04180 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LCATP04180 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
LCATP04180 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.46■□□□□ 0.71
LCATP04180 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LCATP04180 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.46■□□□□ 0.71
LCATP04180 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.46■□□□□ 0.71
LCATP04180 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LCATP04180 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LCATP04180 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms