Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 AC245100.8-202ENST00000629247 1058 ntBASIC21.95■■□□□ 1.1
CPNE6O95741 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE6O95741 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CPNE6O95741 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.95■■□□□ 1.1
CPNE6O95741 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CPNE6O95741 C17orf82-201ENST00000623772 1530 ntBASIC21.95■■□□□ 1.1
CPNE6O95741 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE6O95741 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CPNE6O95741 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE6O95741 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
CPNE6O95741 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.94■■□□□ 1.1
CPNE6O95741 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE6O95741 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.94■■□□□ 1.1
CPNE6O95741 AC011298.3-201ENST00000615796 283 ntBASIC21.94■■□□□ 1.1
CPNE6O95741 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE6O95741 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE6O95741 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.94■■□□□ 1.1
CPNE6O95741 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC21.94■■□□□ 1.1
CPNE6O95741 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE6O95741 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CPNE6O95741 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE6O95741 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.93■■□□□ 1.1
CPNE6O95741 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE6O95741 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE6O95741 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE6O95741 DUSP8P5-201ENST00000422884 1815 ntBASIC21.93■■□□□ 1.1
CPNE6O95741 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
CPNE6O95741 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.93■■□□□ 1.1
CPNE6O95741 AC105265.2-201ENST00000467189 838 ntBASIC21.93■■□□□ 1.1
CPNE6O95741 AC091305.1-201ENST00000479476 895 ntBASIC21.93■■□□□ 1.1
CPNE6O95741 RARRES2P6-201ENST00000567333 442 ntBASIC21.93■■□□□ 1.1
CPNE6O95741 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.93■■□□□ 1.1
CPNE6O95741 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CPNE6O95741 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE6O95741 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE6O95741 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.92■■□□□ 1.1
CPNE6O95741 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE6O95741 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.92■■□□□ 1.1
CPNE6O95741 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE6O95741 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CPNE6O95741 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE6O95741 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE6O95741 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE6O95741 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
CPNE6O95741 HLA-L-211ENST00000482052 1765 ntBASIC21.92■■□□□ 1.1
CPNE6O95741 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CPNE6O95741 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE6O95741 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE6O95741 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE6O95741 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.91■■□□□ 1.1
CPNE6O95741 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE6O95741 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
CPNE6O95741 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE6O95741 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.91■■□□□ 1.1
CPNE6O95741 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.91■■□□□ 1.1
CPNE6O95741 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.91■■□□□ 1.1
CPNE6O95741 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE6O95741 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CPNE6O95741 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.9■■□□□ 1.1
CPNE6O95741 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.9■■□□□ 1.1
CPNE6O95741 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CPNE6O95741 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.9■■□□□ 1.1
CPNE6O95741 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.9■■□□□ 1.1
CPNE6O95741 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE6O95741 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE6O95741 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE6O95741 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE6O95741 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
CPNE6O95741 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.9■■□□□ 1.1
CPNE6O95741 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE6O95741 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.89■■□□□ 1.09
CPNE6O95741 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC21.89■■□□□ 1.09
CPNE6O95741 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.89■■□□□ 1.09
CPNE6O95741 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE6O95741 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE6O95741 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CPNE6O95741 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CPNE6O95741 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
CPNE6O95741 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CPNE6O95741 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE6O95741 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
CPNE6O95741 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE6O95741 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE6O95741 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE6O95741 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE6O95741 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE6O95741 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.88■■□□□ 1.09
CPNE6O95741 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.88■■□□□ 1.09
CPNE6O95741 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
CPNE6O95741 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.88■■□□□ 1.09
CPNE6O95741 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CPNE6O95741 RASA4CP-201ENST00000424092 1398 ntBASIC21.87■■□□□ 1.09
CPNE6O95741 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC21.87■■□□□ 1.09
CPNE6O95741 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE6O95741 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE6O95741 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE6O95741 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE6O95741 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CPNE6O95741 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.87■■□□□ 1.09
CPNE6O95741 AC027682.1-201ENST00000562846 899 ntBASIC21.87■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms