Protein–RNA interactions for Protein: O95551

TDP2, Tyrosyl-DNA phosphodiesterase 2, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2O95551 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
TDP2O95551 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC25.43■■□□□ 1.66
TDP2O95551 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TDP2O95551 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
TDP2O95551 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TDP2O95551 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
TDP2O95551 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TDP2O95551 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC25.42■■□□□ 1.66
TDP2O95551 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC25.42■■□□□ 1.66
TDP2O95551 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC25.42■■□□□ 1.66
TDP2O95551 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
TDP2O95551 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TDP2O95551 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
TDP2O95551 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TDP2O95551 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
TDP2O95551 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TDP2O95551 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
TDP2O95551 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC25.41■■□□□ 1.66
TDP2O95551 CASK-201ENST00000378154 2494 ntTSL 5 BASIC25.41■■□□□ 1.66
TDP2O95551 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TDP2O95551 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC25.41■■□□□ 1.66
TDP2O95551 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TDP2O95551 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC25.41■■□□□ 1.66
TDP2O95551 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC25.41■■□□□ 1.66
TDP2O95551 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
TDP2O95551 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.41■■□□□ 1.66
TDP2O95551 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TDP2O95551 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC25.41■■□□□ 1.66
TDP2O95551 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
TDP2O95551 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC25.41■■□□□ 1.66
TDP2O95551 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
TDP2O95551 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TDP2O95551 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
TDP2O95551 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC25.4■■□□□ 1.66
TDP2O95551 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC25.4■■□□□ 1.66
TDP2O95551 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
TDP2O95551 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC25.4■■□□□ 1.66
TDP2O95551 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
TDP2O95551 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
TDP2O95551 AL353803.4-201ENST00000565882 1934 ntBASIC25.39■■□□□ 1.66
TDP2O95551 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
TDP2O95551 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC25.39■■□□□ 1.66
TDP2O95551 AC009086.3-201ENST00000623486 1008 ntBASIC25.39■■□□□ 1.66
TDP2O95551 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC25.39■■□□□ 1.65
TDP2O95551 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.39■■□□□ 1.65
TDP2O95551 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC25.39■■□□□ 1.65
TDP2O95551 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TDP2O95551 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TDP2O95551 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
TDP2O95551 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TDP2O95551 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC25.38■■□□□ 1.65
TDP2O95551 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TDP2O95551 AC241377.3-202ENST00000626088 1088 ntBASIC25.38■■□□□ 1.65
TDP2O95551 AC241585.3-202ENST00000628937 1088 ntBASIC25.38■■□□□ 1.65
TDP2O95551 AC245100.8-202ENST00000629247 1058 ntBASIC25.38■■□□□ 1.65
TDP2O95551 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TDP2O95551 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TDP2O95551 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
TDP2O95551 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
TDP2O95551 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC25.38■■□□□ 1.65
TDP2O95551 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC25.38■■□□□ 1.65
TDP2O95551 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
TDP2O95551 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC25.38■■□□□ 1.65
TDP2O95551 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC25.38■■□□□ 1.65
TDP2O95551 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC25.37■■□□□ 1.65
TDP2O95551 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC25.37■■□□□ 1.65
TDP2O95551 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
TDP2O95551 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
TDP2O95551 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TDP2O95551 LINC01529-204ENST00000636474 1715 ntBASIC25.37■■□□□ 1.65
TDP2O95551 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
TDP2O95551 GTSE1-AS1-202ENST00000623117 1518 ntBASIC25.37■■□□□ 1.65
TDP2O95551 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
TDP2O95551 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC25.36■■□□□ 1.65
TDP2O95551 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
TDP2O95551 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TDP2O95551 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TDP2O95551 FP325331.1-202ENST00000623531 1380 ntBASIC25.36■■□□□ 1.65
TDP2O95551 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
TDP2O95551 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TDP2O95551 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.36■■□□□ 1.65
TDP2O95551 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
TDP2O95551 AC096631.2-201ENST00000436136 790 ntBASIC25.36■■□□□ 1.65
TDP2O95551 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC25.36■■□□□ 1.65
TDP2O95551 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC25.36■■□□□ 1.65
TDP2O95551 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC25.35■■□□□ 1.65
TDP2O95551 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TDP2O95551 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TDP2O95551 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
TDP2O95551 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC25.35■■□□□ 1.65
TDP2O95551 DUX4L4-201ENST00000566884 1269 ntBASIC25.35■■□□□ 1.65
TDP2O95551 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC25.35■■□□□ 1.65
TDP2O95551 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.35■■□□□ 1.65
TDP2O95551 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC25.35■■□□□ 1.65
TDP2O95551 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC25.34■■□□□ 1.65
TDP2O95551 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
TDP2O95551 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.34■■□□□ 1.65
TDP2O95551 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC25.34■■□□□ 1.65
TDP2O95551 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
TDP2O95551 SERBP1P1-201ENST00000396021 1160 ntBASIC25.34■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms