Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
UBE4BO95155 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
UBE4BO95155 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
UBE4BO95155 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC24.59■■□□□ 1.53
UBE4BO95155 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
UBE4BO95155 LINC01529-204ENST00000636474 1715 ntBASIC24.58■■□□□ 1.53
UBE4BO95155 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC24.58■■□□□ 1.53
UBE4BO95155 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
UBE4BO95155 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC24.58■■□□□ 1.52
UBE4BO95155 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.52
UBE4BO95155 DUX4L4-201ENST00000566884 1269 ntBASIC24.58■■□□□ 1.52
UBE4BO95155 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC24.58■■□□□ 1.52
UBE4BO95155 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
UBE4BO95155 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
UBE4BO95155 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC24.57■■□□□ 1.52
UBE4BO95155 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
UBE4BO95155 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC24.57■■□□□ 1.52
UBE4BO95155 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
UBE4BO95155 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
UBE4BO95155 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC24.57■■□□□ 1.52
UBE4BO95155 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC24.56■■□□□ 1.52
UBE4BO95155 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.56■■□□□ 1.52
UBE4BO95155 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.56■■□□□ 1.52
UBE4BO95155 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC24.56■■□□□ 1.52
UBE4BO95155 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC24.56■■□□□ 1.52
UBE4BO95155 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
UBE4BO95155 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC24.56■■□□□ 1.52
UBE4BO95155 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
UBE4BO95155 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC24.56■■□□□ 1.52
UBE4BO95155 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
UBE4BO95155 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
UBE4BO95155 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
UBE4BO95155 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.55■■□□□ 1.52
UBE4BO95155 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
UBE4BO95155 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
UBE4BO95155 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
UBE4BO95155 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
UBE4BO95155 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC24.55■■□□□ 1.52
UBE4BO95155 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24.55■■□□□ 1.52
UBE4BO95155 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
UBE4BO95155 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
UBE4BO95155 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24.55■■□□□ 1.52
UBE4BO95155 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC24.55■■□□□ 1.52
UBE4BO95155 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
UBE4BO95155 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
UBE4BO95155 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBE4BO95155 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBE4BO95155 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBE4BO95155 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.54■■□□□ 1.52
UBE4BO95155 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC24.54■■□□□ 1.52
UBE4BO95155 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBE4BO95155 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC24.54■■□□□ 1.52
UBE4BO95155 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC24.54■■□□□ 1.52
UBE4BO95155 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC24.54■■□□□ 1.52
UBE4BO95155 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC24.54■■□□□ 1.52
UBE4BO95155 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
UBE4BO95155 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
UBE4BO95155 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
UBE4BO95155 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
UBE4BO95155 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.53■■□□□ 1.52
UBE4BO95155 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
UBE4BO95155 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC24.53■■□□□ 1.52
UBE4BO95155 AL512631.2-201ENST00000604634 923 ntBASIC24.53■■□□□ 1.52
UBE4BO95155 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.52■■□□□ 1.52
UBE4BO95155 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
UBE4BO95155 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
UBE4BO95155 RASSF1-AS1-201ENST00000629828 790 ntBASIC24.52■■□□□ 1.52
UBE4BO95155 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
UBE4BO95155 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC24.51■■□□□ 1.51
UBE4BO95155 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
UBE4BO95155 AC068473.5-201ENST00000616428 2072 ntBASIC24.51■■□□□ 1.51
UBE4BO95155 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
UBE4BO95155 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC24.51■■□□□ 1.51
UBE4BO95155 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
UBE4BO95155 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC24.51■■□□□ 1.51
UBE4BO95155 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
UBE4BO95155 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
UBE4BO95155 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.51■■□□□ 1.51
UBE4BO95155 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC24.51■■□□□ 1.51
UBE4BO95155 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
UBE4BO95155 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.5■■□□□ 1.51
UBE4BO95155 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
UBE4BO95155 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC24.5■■□□□ 1.51
UBE4BO95155 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
UBE4BO95155 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC24.5■■□□□ 1.51
UBE4BO95155 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC24.5■■□□□ 1.51
UBE4BO95155 QDPR-206ENST00000508623 601 ntTSL 3 BASIC24.5■■□□□ 1.51
UBE4BO95155 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
UBE4BO95155 AC241377.3-202ENST00000626088 1088 ntBASIC24.5■■□□□ 1.51
UBE4BO95155 AC241585.3-202ENST00000628937 1088 ntBASIC24.5■■□□□ 1.51
UBE4BO95155 AC245100.8-202ENST00000629247 1058 ntBASIC24.5■■□□□ 1.51
UBE4BO95155 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC24.5■■□□□ 1.51
UBE4BO95155 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
UBE4BO95155 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
UBE4BO95155 SRR-208ENST00000576848 588 ntTSL 4 BASIC24.49■■□□□ 1.51
UBE4BO95155 AC009086.3-201ENST00000623486 1008 ntBASIC24.49■■□□□ 1.51
UBE4BO95155 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
UBE4BO95155 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.49■■□□□ 1.51
UBE4BO95155 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
UBE4BO95155 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.48■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms