Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.09■□□□□ 0.65
TSPAN9O75954 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TSPAN9O75954 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TSPAN9O75954 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TSPAN9O75954 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TSPAN9O75954 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
TSPAN9O75954 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.08■□□□□ 0.64
TSPAN9O75954 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.08■□□□□ 0.64
TSPAN9O75954 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.08■□□□□ 0.64
TSPAN9O75954 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TSPAN9O75954 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TSPAN9O75954 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TSPAN9O75954 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC19.08■□□□□ 0.64
TSPAN9O75954 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
TSPAN9O75954 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TSPAN9O75954 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TSPAN9O75954 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
TSPAN9O75954 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TSPAN9O75954 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TSPAN9O75954 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
TSPAN9O75954 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TSPAN9O75954 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TSPAN9O75954 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TSPAN9O75954 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TSPAN9O75954 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TSPAN9O75954 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TSPAN9O75954 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TSPAN9O75954 AC022616.5-201ENST00000518796 181 ntBASIC19.07■□□□□ 0.64
TSPAN9O75954 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.07■□□□□ 0.64
TSPAN9O75954 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.07■□□□□ 0.64
TSPAN9O75954 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TSPAN9O75954 EP400NL-214ENST00000641289 2402 ntBASIC19.07■□□□□ 0.64
TSPAN9O75954 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TSPAN9O75954 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TSPAN9O75954 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
TSPAN9O75954 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TSPAN9O75954 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TSPAN9O75954 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TSPAN9O75954 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TSPAN9O75954 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
TSPAN9O75954 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TSPAN9O75954 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.06■□□□□ 0.64
TSPAN9O75954 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.06■□□□□ 0.64
TSPAN9O75954 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TSPAN9O75954 AC142381.3-201ENST00000568208 1670 ntBASIC19.05■□□□□ 0.64
TSPAN9O75954 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSPAN9O75954 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TSPAN9O75954 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
TSPAN9O75954 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TSPAN9O75954 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TSPAN9O75954 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TSPAN9O75954 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TSPAN9O75954 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TSPAN9O75954 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TSPAN9O75954 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TSPAN9O75954 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSPAN9O75954 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.04■□□□□ 0.64
TSPAN9O75954 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSPAN9O75954 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSPAN9O75954 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TSPAN9O75954 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TSPAN9O75954 AC137767.1-201ENST00000602918 1920 ntBASIC19.04■□□□□ 0.64
TSPAN9O75954 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TSPAN9O75954 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.03■□□□□ 0.64
TSPAN9O75954 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.03■□□□□ 0.64
TSPAN9O75954 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.03■□□□□ 0.64
TSPAN9O75954 Z92544.1-202ENST00000571933 1220 ntBASIC19.03■□□□□ 0.64
TSPAN9O75954 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.03■□□□□ 0.64
TSPAN9O75954 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.03■□□□□ 0.64
TSPAN9O75954 AC073130.3-201ENST00000624389 2278 ntBASIC19.03■□□□□ 0.64
TSPAN9O75954 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.03■□□□□ 0.64
TSPAN9O75954 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TSPAN9O75954 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TSPAN9O75954 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TSPAN9O75954 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TSPAN9O75954 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
TSPAN9O75954 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.02■□□□□ 0.64
TSPAN9O75954 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TSPAN9O75954 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TSPAN9O75954 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TSPAN9O75954 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.63
TSPAN9O75954 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN9O75954 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
TSPAN9O75954 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN9O75954 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN9O75954 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN9O75954 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN9O75954 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.01■□□□□ 0.63
TSPAN9O75954 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN9O75954 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN9O75954 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN9O75954 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC19.01■□□□□ 0.63
TSPAN9O75954 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN9O75954 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
TSPAN9O75954 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN9O75954 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
TSPAN9O75954 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
TSPAN9O75954 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19■□□□□ 0.63
TSPAN9O75954 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
TSPAN9O75954 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms