Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
PDCD6O75340 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PDCD6O75340 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.89■□□□□ 0.61
PDCD6O75340 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDCD6O75340 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.89■□□□□ 0.61
PDCD6O75340 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
PDCD6O75340 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.89■□□□□ 0.61
PDCD6O75340 MIR4508-201ENST00000584178 70 ntBASIC18.89■□□□□ 0.61
PDCD6O75340 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
PDCD6O75340 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDCD6O75340 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDCD6O75340 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PDCD6O75340 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PDCD6O75340 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDCD6O75340 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.89■□□□□ 0.61
PDCD6O75340 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDCD6O75340 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.89■□□□□ 0.61
PDCD6O75340 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
PDCD6O75340 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PDCD6O75340 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
PDCD6O75340 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDCD6O75340 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
PDCD6O75340 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.88■□□□□ 0.61
PDCD6O75340 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDCD6O75340 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDCD6O75340 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDCD6O75340 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDCD6O75340 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
PDCD6O75340 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDCD6O75340 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
PDCD6O75340 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDCD6O75340 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDCD6O75340 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDCD6O75340 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
PDCD6O75340 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDCD6O75340 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDCD6O75340 AL353803.4-201ENST00000565882 1934 ntBASIC18.87■□□□□ 0.61
PDCD6O75340 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.87■□□□□ 0.61
PDCD6O75340 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDCD6O75340 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.87■□□□□ 0.61
PDCD6O75340 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD6O75340 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD6O75340 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD6O75340 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC18.86■□□□□ 0.61
PDCD6O75340 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD6O75340 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PDCD6O75340 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.86■□□□□ 0.61
PDCD6O75340 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
PDCD6O75340 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDCD6O75340 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.86■□□□□ 0.61
PDCD6O75340 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDCD6O75340 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDCD6O75340 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.85■□□□□ 0.61
PDCD6O75340 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
PDCD6O75340 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDCD6O75340 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.85■□□□□ 0.61
PDCD6O75340 AC127496.7-201ENST00000625110 1798 ntBASIC18.85■□□□□ 0.61
PDCD6O75340 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDCD6O75340 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDCD6O75340 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDCD6O75340 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.84■□□□□ 0.61
PDCD6O75340 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC18.84■□□□□ 0.61
PDCD6O75340 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD6O75340 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.84■□□□□ 0.61
PDCD6O75340 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.84■□□□□ 0.61
PDCD6O75340 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.84■□□□□ 0.61
PDCD6O75340 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD6O75340 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD6O75340 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD6O75340 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
PDCD6O75340 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD6O75340 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC18.84■□□□□ 0.61
PDCD6O75340 SNX5-217ENST00000606557 1087 ntBASIC18.84■□□□□ 0.61
PDCD6O75340 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.84■□□□□ 0.61
PDCD6O75340 AC012354.3-201ENST00000623734 483 ntBASIC18.84■□□□□ 0.61
PDCD6O75340 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD6O75340 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD6O75340 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD6O75340 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.84■□□□□ 0.61
PDCD6O75340 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD6O75340 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDCD6O75340 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC18.84■□□□□ 0.61
PDCD6O75340 AC242852.2-201ENST00000615738 1807 ntBASIC18.84■□□□□ 0.61
PDCD6O75340 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC18.83■□□□□ 0.61
PDCD6O75340 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.83■□□□□ 0.61
PDCD6O75340 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PDCD6O75340 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.83■□□□□ 0.61
PDCD6O75340 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
PDCD6O75340 LINC00565-201ENST00000562710 2331 ntBASIC18.83■□□□□ 0.61
PDCD6O75340 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDCD6O75340 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PDCD6O75340 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PDCD6O75340 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDCD6O75340 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDCD6O75340 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDCD6O75340 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.83■□□□□ 0.6
PDCD6O75340 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.83■□□□□ 0.6
PDCD6O75340 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDCD6O75340 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PDCD6O75340 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms