Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGA12O60330 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGA12O60330 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
PCDHGA12O60330 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.16■■□□□ 1.14
PCDHGA12O60330 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDHGA12O60330 YBX1P1-201ENST00000445822 960 ntBASIC22.16■■□□□ 1.14
PCDHGA12O60330 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDHGA12O60330 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
PCDHGA12O60330 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGA12O60330 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHGA12O60330 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGA12O60330 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHGA12O60330 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC22.16■■□□□ 1.14
PCDHGA12O60330 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA12O60330 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA12O60330 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC22.15■■□□□ 1.14
PCDHGA12O60330 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA12O60330 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA12O60330 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA12O60330 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
PCDHGA12O60330 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHGA12O60330 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.15■■□□□ 1.14
PCDHGA12O60330 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.15■■□□□ 1.14
PCDHGA12O60330 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA12O60330 AC126544.1-201ENST00000580842 1059 ntBASIC22.15■■□□□ 1.14
PCDHGA12O60330 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA12O60330 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHGA12O60330 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHGA12O60330 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHGA12O60330 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGA12O60330 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGA12O60330 RARRES2P11-201ENST00000635158 484 ntBASIC22.14■■□□□ 1.13
PCDHGA12O60330 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
PCDHGA12O60330 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
PCDHGA12O60330 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHGA12O60330 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHGA12O60330 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGA12O60330 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGA12O60330 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGA12O60330 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC22.13■■□□□ 1.13
PCDHGA12O60330 pRNA.6-201ENST00000610482 90 ntBASIC22.13■■□□□ 1.13
PCDHGA12O60330 pRNA.5-201ENST00000612139 90 ntBASIC22.13■■□□□ 1.13
PCDHGA12O60330 pRNA.11-201ENST00000618423 90 ntBASIC22.13■■□□□ 1.13
PCDHGA12O60330 pRNA.13-201ENST00000619112 90 ntBASIC22.13■■□□□ 1.13
PCDHGA12O60330 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGA12O60330 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGA12O60330 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHGA12O60330 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGA12O60330 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGA12O60330 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGA12O60330 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGA12O60330 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHGA12O60330 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHGA12O60330 AC022517.1-201ENST00000592429 346 ntBASIC22.12■■□□□ 1.13
PCDHGA12O60330 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHGA12O60330 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGA12O60330 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHGA12O60330 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHGA12O60330 GTSE1-AS1-202ENST00000623117 1518 ntBASIC22.11■■□□□ 1.13
PCDHGA12O60330 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGA12O60330 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDHGA12O60330 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
PCDHGA12O60330 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
PCDHGA12O60330 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
PCDHGA12O60330 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGA12O60330 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGA12O60330 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGA12O60330 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC22.11■■□□□ 1.13
PCDHGA12O60330 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
PCDHGA12O60330 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDHGA12O60330 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
PCDHGA12O60330 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGA12O60330 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHGA12O60330 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PCDHGA12O60330 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA12O60330 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA12O60330 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC22.1■■□□□ 1.13
PCDHGA12O60330 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA12O60330 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA12O60330 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA12O60330 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA12O60330 NME4-202ENST00000382940 766 ntTSL 3 BASIC22.1■■□□□ 1.13
PCDHGA12O60330 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC22.1■■□□□ 1.13
PCDHGA12O60330 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHGA12O60330 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA12O60330 AC090192.1-201ENST00000517740 490 ntBASIC22.1■■□□□ 1.13
PCDHGA12O60330 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA12O60330 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA12O60330 NME4-211ENST00000620944 1193 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHGA12O60330 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
PCDHGA12O60330 AL358852.1-201ENST00000623174 1268 ntBASIC22.1■■□□□ 1.13
PCDHGA12O60330 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA12O60330 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA12O60330 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA12O60330 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
PCDHGA12O60330 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHGA12O60330 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHGA12O60330 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.09■■□□□ 1.13
PCDHGA12O60330 TSPY26P-201ENST00000476365 1326 ntBASIC22.09■■□□□ 1.13
PCDHGA12O60330 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms