Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
ZFC3H1O60293 AL139246.5-201ENST00000606645 996 ntBASIC22.21■■□□□ 1.15
ZFC3H1O60293 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.21■■□□□ 1.15
ZFC3H1O60293 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZFC3H1O60293 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.21■■□□□ 1.15
ZFC3H1O60293 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZFC3H1O60293 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
ZFC3H1O60293 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZFC3H1O60293 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZFC3H1O60293 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
ZFC3H1O60293 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.21■■□□□ 1.15
ZFC3H1O60293 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.2■■□□□ 1.15
ZFC3H1O60293 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.2■■□□□ 1.15
ZFC3H1O60293 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.2■■□□□ 1.14
ZFC3H1O60293 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZFC3H1O60293 DUX4L19-201ENST00000557448 1267 ntBASIC22.2■■□□□ 1.14
ZFC3H1O60293 DUSP8P5-201ENST00000422884 1815 ntBASIC22.2■■□□□ 1.14
ZFC3H1O60293 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.2■■□□□ 1.14
ZFC3H1O60293 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZFC3H1O60293 AC009102.2-201ENST00000606772 1639 ntBASIC22.2■■□□□ 1.14
ZFC3H1O60293 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
ZFC3H1O60293 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.19■■□□□ 1.14
ZFC3H1O60293 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZFC3H1O60293 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
ZFC3H1O60293 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.19■■□□□ 1.14
ZFC3H1O60293 ALDH1A3-203ENST00000557963 1670 ntBASIC22.19■■□□□ 1.14
ZFC3H1O60293 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZFC3H1O60293 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
ZFC3H1O60293 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.18■■□□□ 1.14
ZFC3H1O60293 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
ZFC3H1O60293 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ZFC3H1O60293 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ZFC3H1O60293 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ZFC3H1O60293 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.18■■□□□ 1.14
ZFC3H1O60293 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ZFC3H1O60293 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.18■■□□□ 1.14
ZFC3H1O60293 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ZFC3H1O60293 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.17■■□□□ 1.14
ZFC3H1O60293 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.17■■□□□ 1.14
ZFC3H1O60293 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZFC3H1O60293 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ZFC3H1O60293 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.17■■□□□ 1.14
ZFC3H1O60293 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ZFC3H1O60293 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.17■■□□□ 1.14
ZFC3H1O60293 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.17■■□□□ 1.14
ZFC3H1O60293 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ZFC3H1O60293 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ZFC3H1O60293 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ZFC3H1O60293 AC024257.2-201ENST00000549699 147 ntBASIC22.16■■□□□ 1.14
ZFC3H1O60293 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZFC3H1O60293 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZFC3H1O60293 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZFC3H1O60293 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ZFC3H1O60293 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.16■■□□□ 1.14
ZFC3H1O60293 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
ZFC3H1O60293 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC22.16■■□□□ 1.14
ZFC3H1O60293 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.15■■□□□ 1.14
ZFC3H1O60293 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ZFC3H1O60293 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ZFC3H1O60293 C9orf163-202ENST00000624034 2573 ntBASIC22.15■■□□□ 1.14
ZFC3H1O60293 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.15■■□□□ 1.14
ZFC3H1O60293 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
ZFC3H1O60293 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
ZFC3H1O60293 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.15■■□□□ 1.14
ZFC3H1O60293 AL031432.3-201ENST00000607698 485 ntBASIC22.14■■□□□ 1.14
ZFC3H1O60293 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.14■■□□□ 1.14
ZFC3H1O60293 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
ZFC3H1O60293 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
ZFC3H1O60293 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZFC3H1O60293 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZFC3H1O60293 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ZFC3H1O60293 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC22.14■■□□□ 1.13
ZFC3H1O60293 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC22.14■■□□□ 1.13
ZFC3H1O60293 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ZFC3H1O60293 AC006455.2-201ENST00000429931 906 ntBASIC22.14■■□□□ 1.13
ZFC3H1O60293 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.13
ZFC3H1O60293 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZFC3H1O60293 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.13■■□□□ 1.13
ZFC3H1O60293 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
ZFC3H1O60293 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
ZFC3H1O60293 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZFC3H1O60293 AC135279.3-201ENST00000610945 1311 ntBASIC22.13■■□□□ 1.13
ZFC3H1O60293 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZFC3H1O60293 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ZFC3H1O60293 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ZFC3H1O60293 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ZFC3H1O60293 H19-210ENST00000439725 1929 ntTSL 2 BASIC22.12■■□□□ 1.13
ZFC3H1O60293 UNC93B3-201ENST00000308076 687 ntBASIC22.12■■□□□ 1.13
ZFC3H1O60293 AC133561.4-201ENST00000566112 224 ntBASIC22.12■■□□□ 1.13
ZFC3H1O60293 AC099791.2-201ENST00000605725 427 ntBASIC22.12■■□□□ 1.13
ZFC3H1O60293 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.12■■□□□ 1.13
ZFC3H1O60293 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ZFC3H1O60293 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
ZFC3H1O60293 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.11■■□□□ 1.13
ZFC3H1O60293 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.11■■□□□ 1.13
ZFC3H1O60293 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
ZFC3H1O60293 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.11■■□□□ 1.13
ZFC3H1O60293 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
ZFC3H1O60293 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.11■■□□□ 1.13
ZFC3H1O60293 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms