Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC18.25■□□□□ 0.51
SSSCA1O60232 GFER-205ENST00000569451 517 ntTSL 5 BASIC18.25■□□□□ 0.51
SSSCA1O60232 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SSSCA1O60232 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SSSCA1O60232 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSSCA1O60232 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SSSCA1O60232 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSSCA1O60232 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.24■□□□□ 0.51
SSSCA1O60232 AL022069.1-201ENST00000568025 1636 ntBASIC18.24■□□□□ 0.51
SSSCA1O60232 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.24■□□□□ 0.51
SSSCA1O60232 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SSSCA1O60232 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.24■□□□□ 0.51
SSSCA1O60232 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC18.24■□□□□ 0.51
SSSCA1O60232 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
SSSCA1O60232 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SSSCA1O60232 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSSCA1O60232 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SSSCA1O60232 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.24■□□□□ 0.51
SSSCA1O60232 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SSSCA1O60232 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SSSCA1O60232 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SSSCA1O60232 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSSCA1O60232 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SSSCA1O60232 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SSSCA1O60232 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SSSCA1O60232 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC18.23■□□□□ 0.51
SSSCA1O60232 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSSCA1O60232 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.23■□□□□ 0.51
SSSCA1O60232 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSSCA1O60232 AC022413.1-201ENST00000624602 984 ntBASIC18.23■□□□□ 0.51
SSSCA1O60232 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSSCA1O60232 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SSSCA1O60232 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
SSSCA1O60232 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSSCA1O60232 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.23■□□□□ 0.51
SSSCA1O60232 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SSSCA1O60232 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.22■□□□□ 0.51
SSSCA1O60232 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SSSCA1O60232 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSSCA1O60232 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSSCA1O60232 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
SSSCA1O60232 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SSSCA1O60232 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.22■□□□□ 0.51
SSSCA1O60232 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SSSCA1O60232 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC18.22■□□□□ 0.51
SSSCA1O60232 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.22■□□□□ 0.51
SSSCA1O60232 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SSSCA1O60232 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSSCA1O60232 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.21■□□□□ 0.51
SSSCA1O60232 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.21■□□□□ 0.51
SSSCA1O60232 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSSCA1O60232 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSSCA1O60232 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSSCA1O60232 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SSSCA1O60232 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSSCA1O60232 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
SSSCA1O60232 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
SSSCA1O60232 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
SSSCA1O60232 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
SSSCA1O60232 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSSCA1O60232 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSSCA1O60232 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSSCA1O60232 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSSCA1O60232 ABHD17AP4-201ENST00000411545 909 ntBASIC18.2■□□□□ 0.5
SSSCA1O60232 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.2■□□□□ 0.5
SSSCA1O60232 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSSCA1O60232 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSSCA1O60232 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
SSSCA1O60232 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
SSSCA1O60232 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
SSSCA1O60232 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.2■□□□□ 0.5
SSSCA1O60232 EI24-204ENST00000527235 1625 ntTSL 5 BASIC18.2■□□□□ 0.5
SSSCA1O60232 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC18.19■□□□□ 0.5
SSSCA1O60232 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSSCA1O60232 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.19■□□□□ 0.5
SSSCA1O60232 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSSCA1O60232 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.19■□□□□ 0.5
SSSCA1O60232 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.19■□□□□ 0.5
SSSCA1O60232 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SSSCA1O60232 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSSCA1O60232 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SSSCA1O60232 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
SSSCA1O60232 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.19■□□□□ 0.5
SSSCA1O60232 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.19■□□□□ 0.5
SSSCA1O60232 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SSSCA1O60232 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SSSCA1O60232 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSSCA1O60232 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.19■□□□□ 0.5
SSSCA1O60232 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
SSSCA1O60232 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSSCA1O60232 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSSCA1O60232 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
SSSCA1O60232 ALDH1A3-203ENST00000557963 1670 ntBASIC18.18■□□□□ 0.5
SSSCA1O60232 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.18■□□□□ 0.5
SSSCA1O60232 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
SSSCA1O60232 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.18■□□□□ 0.5
SSSCA1O60232 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.18■□□□□ 0.5
SSSCA1O60232 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSSCA1O60232 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SSSCA1O60232 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms