Protein–RNA interactions for Protein: A6NFE3

EFCAB10, EF-hand calcium-binding domain-containing protein 10, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB10A6NFE3 AC026202.3-201ENST00000600805 1127 ntBASIC20.31■□□□□ 0.84
EFCAB10A6NFE3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
EFCAB10A6NFE3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EFCAB10A6NFE3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EFCAB10A6NFE3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
EFCAB10A6NFE3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
EFCAB10A6NFE3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.31■□□□□ 0.84
EFCAB10A6NFE3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.31■□□□□ 0.84
EFCAB10A6NFE3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
EFCAB10A6NFE3 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.3■□□□□ 0.84
EFCAB10A6NFE3 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.3■□□□□ 0.84
EFCAB10A6NFE3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.3■□□□□ 0.84
EFCAB10A6NFE3 AC016575.1-201ENST00000607026 382 ntBASIC20.3■□□□□ 0.84
EFCAB10A6NFE3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.3■□□□□ 0.84
EFCAB10A6NFE3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
EFCAB10A6NFE3 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
EFCAB10A6NFE3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.28■□□□□ 0.84
EFCAB10A6NFE3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCAB10A6NFE3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCAB10A6NFE3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
EFCAB10A6NFE3 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCAB10A6NFE3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.28■□□□□ 0.84
EFCAB10A6NFE3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCAB10A6NFE3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
EFCAB10A6NFE3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCAB10A6NFE3 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCAB10A6NFE3 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
EFCAB10A6NFE3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.27■□□□□ 0.84
EFCAB10A6NFE3 C11orf96-202ENST00000528572 1834 ntBASIC20.27■□□□□ 0.84
EFCAB10A6NFE3 AC092053.2-201ENST00000640557 1818 ntBASIC20.27■□□□□ 0.84
EFCAB10A6NFE3 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCAB10A6NFE3 ALDH1A3-203ENST00000557963 1670 ntBASIC20.27■□□□□ 0.84
EFCAB10A6NFE3 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.27■□□□□ 0.84
EFCAB10A6NFE3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
EFCAB10A6NFE3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
EFCAB10A6NFE3 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
EFCAB10A6NFE3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.26■□□□□ 0.83
EFCAB10A6NFE3 AL137060.1-201ENST00000618151 2648 ntBASIC20.26■□□□□ 0.83
EFCAB10A6NFE3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
EFCAB10A6NFE3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EFCAB10A6NFE3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCAB10A6NFE3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCAB10A6NFE3 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EFCAB10A6NFE3 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCAB10A6NFE3 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
EFCAB10A6NFE3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.26■□□□□ 0.83
EFCAB10A6NFE3 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
EFCAB10A6NFE3 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
EFCAB10A6NFE3 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
EFCAB10A6NFE3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
EFCAB10A6NFE3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.25■□□□□ 0.83
EFCAB10A6NFE3 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EFCAB10A6NFE3 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EFCAB10A6NFE3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.25■□□□□ 0.83
EFCAB10A6NFE3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
EFCAB10A6NFE3 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
EFCAB10A6NFE3 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
EFCAB10A6NFE3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EFCAB10A6NFE3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
EFCAB10A6NFE3 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFCAB10A6NFE3 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
EFCAB10A6NFE3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFCAB10A6NFE3 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC20.24■□□□□ 0.83
EFCAB10A6NFE3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
EFCAB10A6NFE3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFCAB10A6NFE3 AC139530.1-201ENST00000575312 1977 ntBASIC20.24■□□□□ 0.83
EFCAB10A6NFE3 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFCAB10A6NFE3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
EFCAB10A6NFE3 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
EFCAB10A6NFE3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
EFCAB10A6NFE3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.23■□□□□ 0.83
EFCAB10A6NFE3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
EFCAB10A6NFE3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
EFCAB10A6NFE3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.23■□□□□ 0.83
EFCAB10A6NFE3 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms