Protein–RNA interactions for Protein: A5X5Y0

HTR3E, 5-hydroxytryptamine receptor 3E, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3EA5X5Y0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HTR3EA5X5Y0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
HTR3EA5X5Y0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HTR3EA5X5Y0 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTR3EA5X5Y0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HTR3EA5X5Y0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HTR3EA5X5Y0 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTR3EA5X5Y0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTR3EA5X5Y0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
HTR3EA5X5Y0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.61■□□□□ 0.89
HTR3EA5X5Y0 ANOS2P-203ENST00000472227 1816 ntBASIC20.61■□□□□ 0.89
HTR3EA5X5Y0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTR3EA5X5Y0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTR3EA5X5Y0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTR3EA5X5Y0 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTR3EA5X5Y0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HTR3EA5X5Y0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.61■□□□□ 0.89
HTR3EA5X5Y0 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3EA5X5Y0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3EA5X5Y0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3EA5X5Y0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.6■□□□□ 0.89
HTR3EA5X5Y0 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3EA5X5Y0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.6■□□□□ 0.89
HTR3EA5X5Y0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.6■□□□□ 0.89
HTR3EA5X5Y0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
HTR3EA5X5Y0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3EA5X5Y0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HTR3EA5X5Y0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.59■□□□□ 0.89
HTR3EA5X5Y0 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTR3EA5X5Y0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTR3EA5X5Y0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.59■□□□□ 0.89
HTR3EA5X5Y0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.59■□□□□ 0.89
HTR3EA5X5Y0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTR3EA5X5Y0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.59■□□□□ 0.89
HTR3EA5X5Y0 MIR4281-201ENST00000580852 62 ntBASIC20.59■□□□□ 0.89
HTR3EA5X5Y0 MIR4508-201ENST00000584178 70 ntBASIC20.59■□□□□ 0.89
HTR3EA5X5Y0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
HTR3EA5X5Y0 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.59■□□□□ 0.89
HTR3EA5X5Y0 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.59■□□□□ 0.89
HTR3EA5X5Y0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTR3EA5X5Y0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTR3EA5X5Y0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTR3EA5X5Y0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HTR3EA5X5Y0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.58■□□□□ 0.89
HTR3EA5X5Y0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
HTR3EA5X5Y0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
HTR3EA5X5Y0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
HTR3EA5X5Y0 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
HTR3EA5X5Y0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.58■□□□□ 0.89
HTR3EA5X5Y0 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
HTR3EA5X5Y0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HTR3EA5X5Y0 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HTR3EA5X5Y0 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
HTR3EA5X5Y0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 AC004448.1-201ENST00000458332 883 ntBASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 AF131216.4-201ENST00000638924 1588 ntBASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
HTR3EA5X5Y0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR3EA5X5Y0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR3EA5X5Y0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.56■□□□□ 0.88
HTR3EA5X5Y0 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.56■□□□□ 0.88
HTR3EA5X5Y0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.56■□□□□ 0.88
HTR3EA5X5Y0 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HTR3EA5X5Y0 AC012354.3-201ENST00000623734 483 ntBASIC20.56■□□□□ 0.88
HTR3EA5X5Y0 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR3EA5X5Y0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR3EA5X5Y0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
HTR3EA5X5Y0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC20.56■□□□□ 0.88
HTR3EA5X5Y0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HTR3EA5X5Y0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HTR3EA5X5Y0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HTR3EA5X5Y0 AC137767.1-201ENST00000602918 1920 ntBASIC20.55■□□□□ 0.88
HTR3EA5X5Y0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR3EA5X5Y0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR3EA5X5Y0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR3EA5X5Y0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR3EA5X5Y0 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR3EA5X5Y0 DUSP8P3-201ENST00000399571 1760 ntBASIC20.55■□□□□ 0.88
HTR3EA5X5Y0 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HTR3EA5X5Y0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.55■□□□□ 0.88
HTR3EA5X5Y0 PVT1_1.1-201ENST00000615125 194 ntBASIC20.55■□□□□ 0.88
HTR3EA5X5Y0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.55■□□□□ 0.88
HTR3EA5X5Y0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.55■□□□□ 0.88
HTR3EA5X5Y0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR3EA5X5Y0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HTR3EA5X5Y0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms