Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV6-4A0A1B0GX49 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC15.8■□□□□ 0.12
TRBV6-4A0A1B0GX49 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC15.8■□□□□ 0.12
TRBV6-4A0A1B0GX49 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
TRBV6-4A0A1B0GX49 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TRBV6-4A0A1B0GX49 MTDHP2-201ENST00000601468 714 ntBASIC15.8■□□□□ 0.12
TRBV6-4A0A1B0GX49 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV6-4A0A1B0GX49 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV6-4A0A1B0GX49 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRBV6-4A0A1B0GX49 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC15.8■□□□□ 0.12
TRBV6-4A0A1B0GX49 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 AL353803.4-201ENST00000565882 1934 ntBASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC15.79■□□□□ 0.12
TRBV6-4A0A1B0GX49 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 FP325331.1-202ENST00000623531 1380 ntBASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 AC239859.2-201ENST00000444165 318 ntBASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRBV6-4A0A1B0GX49 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-4A0A1B0GX49 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRBV6-4A0A1B0GX49 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC15.77■□□□□ 0.12
TRBV6-4A0A1B0GX49 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-4A0A1B0GX49 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRBV6-4A0A1B0GX49 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-4A0A1B0GX49 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-4A0A1B0GX49 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-4A0A1B0GX49 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-4A0A1B0GX49 CLTA-206ENST00000466396 695 ntTSL 2 BASIC15.77■□□□□ 0.12
TRBV6-4A0A1B0GX49 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.77■□□□□ 0.12
TRBV6-4A0A1B0GX49 AC009299.2-201ENST00000482477 511 ntBASIC15.77■□□□□ 0.12
TRBV6-4A0A1B0GX49 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRBV6-4A0A1B0GX49 EXOG-217ENST00000630638 197 ntTSL 5 BASIC15.77■□□□□ 0.12
TRBV6-4A0A1B0GX49 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.77■□□□□ 0.11
TRBV6-4A0A1B0GX49 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV6-4A0A1B0GX49 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
TRBV6-4A0A1B0GX49 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV6-4A0A1B0GX49 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC15.77■□□□□ 0.11
TRBV6-4A0A1B0GX49 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV6-4A0A1B0GX49 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV6-4A0A1B0GX49 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRBV6-4A0A1B0GX49 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV6-4A0A1B0GX49 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV6-4A0A1B0GX49 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRBV6-4A0A1B0GX49 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRBV6-4A0A1B0GX49 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV6-4A0A1B0GX49 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV6-4A0A1B0GX49 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
TRBV6-4A0A1B0GX49 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV6-4A0A1B0GX49 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV6-4A0A1B0GX49 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.76■□□□□ 0.11
TRBV6-4A0A1B0GX49 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV6-4A0A1B0GX49 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRBV6-4A0A1B0GX49 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRBV6-4A0A1B0GX49 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC15.75■□□□□ 0.11
TRBV6-4A0A1B0GX49 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRBV6-4A0A1B0GX49 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-4A0A1B0GX49 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-4A0A1B0GX49 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-4A0A1B0GX49 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRBV6-4A0A1B0GX49 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRBV6-4A0A1B0GX49 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV6-4A0A1B0GX49 AC010997.5-201ENST00000609182 354 ntBASIC15.75■□□□□ 0.11
TRBV6-4A0A1B0GX49 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
TRBV6-4A0A1B0GX49 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC15.75■□□□□ 0.11
TRBV6-4A0A1B0GX49 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
TRBV6-4A0A1B0GX49 LINC01529-204ENST00000636474 1715 ntBASIC15.74■□□□□ 0.11
TRBV6-4A0A1B0GX49 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms