Protein–RNA interactions for Protein: A0A0B4J273

TRAV34, T-cell receptor alpha variable 34 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV34A0A0B4J273 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV34A0A0B4J273 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV34A0A0B4J273 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV34A0A0B4J273 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV34A0A0B4J273 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRAV34A0A0B4J273 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRAV34A0A0B4J273 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV34A0A0B4J273 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV34A0A0B4J273 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV34A0A0B4J273 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV34A0A0B4J273 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.24■□□□□ 0.35
TRAV34A0A0B4J273 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV34A0A0B4J273 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV34A0A0B4J273 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV34A0A0B4J273 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV34A0A0B4J273 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV34A0A0B4J273 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV34A0A0B4J273 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV34A0A0B4J273 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV34A0A0B4J273 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 AL121603.2-201ENST00000557373 2117 ntBASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
TRAV34A0A0B4J273 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV34A0A0B4J273 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV34A0A0B4J273 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV34A0A0B4J273 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV34A0A0B4J273 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV34A0A0B4J273 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV34A0A0B4J273 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
TRAV34A0A0B4J273 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV34A0A0B4J273 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.22■□□□□ 0.35
TRAV34A0A0B4J273 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRAV34A0A0B4J273 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
TRAV34A0A0B4J273 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV34A0A0B4J273 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.22■□□□□ 0.35
TRAV34A0A0B4J273 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV34A0A0B4J273 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TRAV34A0A0B4J273 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV34A0A0B4J273 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV34A0A0B4J273 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRAV34A0A0B4J273 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
TRAV34A0A0B4J273 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV34A0A0B4J273 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV34A0A0B4J273 MYB-221ENST00000527615 2381 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV34A0A0B4J273 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAV34A0A0B4J273 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV34A0A0B4J273 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV34A0A0B4J273 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAV34A0A0B4J273 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAV34A0A0B4J273 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TRAV34A0A0B4J273 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV34A0A0B4J273 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TRAV34A0A0B4J273 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TRAV34A0A0B4J273 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.21■□□□□ 0.34
TRAV34A0A0B4J273 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV34A0A0B4J273 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV34A0A0B4J273 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV34A0A0B4J273 ABHD17AP4-201ENST00000411545 909 ntBASIC17.2■□□□□ 0.34
TRAV34A0A0B4J273 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV34A0A0B4J273 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV34A0A0B4J273 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV34A0A0B4J273 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV34A0A0B4J273 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.2■□□□□ 0.34
TRAV34A0A0B4J273 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV34A0A0B4J273 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV34A0A0B4J273 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV34A0A0B4J273 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 AL137060.1-201ENST00000618151 2648 ntBASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 AC090877.2-201ENST00000558441 1738 ntBASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.19■□□□□ 0.34
TRAV34A0A0B4J273 AC007029.1-201ENST00000604183 313 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms