Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 THA1P-201ENST00000590384 1145 ntBASIC15.78■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 KRT18P24-201ENST00000344739 1156 ntBASIC15.77■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV8-3A0A0A6YYJ7 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC15.77■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 AC090877.2-201ENST00000558441 1738 ntBASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 TERT-206ENST00000508104 2486 ntTSL 5 BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 AL031848.2-201ENST00000607670 837 ntBASIC15.74■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC15.74■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 C1orf229-201ENST00000623686 2258 ntBASIC15.74■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC15.74■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 EFS-203ENST00000429593 2610 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 AC103834.1-201ENST00000520383 144 ntBASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.73■□□□□ 0.11
TRAV8-3A0A0A6YYJ7 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms