Protein–RNA interactions for Protein: Q96KF2

PRAC1, Small nuclear protein PRAC1, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1Q96KF2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC13.91□□□□□ -0.18
PRAC1Q96KF2 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRAC1Q96KF2 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PRAC1Q96KF2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC13.9□□□□□ -0.18
PRAC1Q96KF2 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PRAC1Q96KF2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC13.9□□□□□ -0.18
PRAC1Q96KF2 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC13.9□□□□□ -0.18
PRAC1Q96KF2 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAC1Q96KF2 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PRAC1Q96KF2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRAC1Q96KF2 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
PRAC1Q96KF2 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PRAC1Q96KF2 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC13.87□□□□□ -0.19
PRAC1Q96KF2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC13.87□□□□□ -0.19
PRAC1Q96KF2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PRAC1Q96KF2 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PRAC1Q96KF2 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC13.86□□□□□ -0.19
PRAC1Q96KF2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC13.85□□□□□ -0.19
PRAC1Q96KF2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRAC1Q96KF2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
PRAC1Q96KF2 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
PRAC1Q96KF2 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
PRAC1Q96KF2 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
PRAC1Q96KF2 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
PRAC1Q96KF2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PRAC1Q96KF2 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
PRAC1Q96KF2 PKM-204ENST00000449901 2526 ntTSL 2 BASIC13.81□□□□□ -0.2
PRAC1Q96KF2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC13.8□□□□□ -0.2
PRAC1Q96KF2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
PRAC1Q96KF2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PRAC1Q96KF2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PRAC1Q96KF2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRAC1Q96KF2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC13.79□□□□□ -0.2
PRAC1Q96KF2 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRAC1Q96KF2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PRAC1Q96KF2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PRAC1Q96KF2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
PRAC1Q96KF2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PRAC1Q96KF2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PRAC1Q96KF2 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
PRAC1Q96KF2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
PRAC1Q96KF2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRAC1Q96KF2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRAC1Q96KF2 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PRAC1Q96KF2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
PRAC1Q96KF2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
PRAC1Q96KF2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC13.74□□□□□ -0.21
PRAC1Q96KF2 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PRAC1Q96KF2 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PRAC1Q96KF2 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
PRAC1Q96KF2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
PRAC1Q96KF2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC13.72□□□□□ -0.21
PRAC1Q96KF2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRAC1Q96KF2 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
PRAC1Q96KF2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
PRAC1Q96KF2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PRAC1Q96KF2 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PRAC1Q96KF2 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRAC1Q96KF2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PRAC1Q96KF2 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
PRAC1Q96KF2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRAC1Q96KF2 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PRAC1Q96KF2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
PRAC1Q96KF2 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PRAC1Q96KF2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PRAC1Q96KF2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PRAC1Q96KF2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PRAC1Q96KF2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
PRAC1Q96KF2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
PRAC1Q96KF2 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
PRAC1Q96KF2 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
PRAC1Q96KF2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
PRAC1Q96KF2 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
PRAC1Q96KF2 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
PRAC1Q96KF2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
PRAC1Q96KF2 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC13.61□□□□□ -0.23
PRAC1Q96KF2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC13.61□□□□□ -0.23
PRAC1Q96KF2 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PRAC1Q96KF2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
PRAC1Q96KF2 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PRAC1Q96KF2 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PRAC1Q96KF2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
PRAC1Q96KF2 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
PRAC1Q96KF2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PRAC1Q96KF2 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
PRAC1Q96KF2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
PRAC1Q96KF2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PRAC1Q96KF2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PRAC1Q96KF2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRAC1Q96KF2 ABCB10P3-201ENST00000561950 2166 ntBASIC13.55□□□□□ -0.24
PRAC1Q96KF2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC13.55□□□□□ -0.24
PRAC1Q96KF2 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PRAC1Q96KF2 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PRAC1Q96KF2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PRAC1Q96KF2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PRAC1Q96KF2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
PRAC1Q96KF2 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC13.54□□□□□ -0.24
PRAC1Q96KF2 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PRAC1Q96KF2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC13.53□□□□□ -0.24
PRAC1Q96KF2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms