Protein–RNA interactions for Protein: Q8N668

COMMD1, COMM domain-containing protein 1, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1Q8N668 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
COMMD1Q8N668 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
COMMD1Q8N668 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
COMMD1Q8N668 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC22.74■■□□□ 1.23
COMMD1Q8N668 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COMMD1Q8N668 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
COMMD1Q8N668 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
COMMD1Q8N668 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
COMMD1Q8N668 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
COMMD1Q8N668 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
COMMD1Q8N668 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
COMMD1Q8N668 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.23
COMMD1Q8N668 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
COMMD1Q8N668 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC22.7■■□□□ 1.22
COMMD1Q8N668 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
COMMD1Q8N668 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
COMMD1Q8N668 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
COMMD1Q8N668 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
COMMD1Q8N668 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC22.66■■□□□ 1.22
COMMD1Q8N668 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COMMD1Q8N668 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
COMMD1Q8N668 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COMMD1Q8N668 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC22.64■■□□□ 1.21
COMMD1Q8N668 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COMMD1Q8N668 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
COMMD1Q8N668 AC145285.7-201ENST00000614819 1539 ntBASIC22.62■■□□□ 1.21
COMMD1Q8N668 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
COMMD1Q8N668 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
COMMD1Q8N668 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC22.61■■□□□ 1.21
COMMD1Q8N668 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC22.61■■□□□ 1.21
COMMD1Q8N668 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC22.59■■□□□ 1.21
COMMD1Q8N668 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
COMMD1Q8N668 DYNLL1-208ENST00000550178 581 ntBASIC22.58■■□□□ 1.21
COMMD1Q8N668 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
COMMD1Q8N668 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC22.57■■□□□ 1.2
COMMD1Q8N668 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
COMMD1Q8N668 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
COMMD1Q8N668 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
COMMD1Q8N668 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COMMD1Q8N668 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
COMMD1Q8N668 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC22.57■■□□□ 1.2
COMMD1Q8N668 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
COMMD1Q8N668 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
COMMD1Q8N668 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
COMMD1Q8N668 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
COMMD1Q8N668 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC22.54■■□□□ 1.2
COMMD1Q8N668 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
COMMD1Q8N668 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
COMMD1Q8N668 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
COMMD1Q8N668 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
COMMD1Q8N668 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
COMMD1Q8N668 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
COMMD1Q8N668 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
COMMD1Q8N668 ABCB10P3-201ENST00000561950 2166 ntBASIC22.46■■□□□ 1.19
COMMD1Q8N668 AC139426.1-201ENST00000568218 2529 ntBASIC22.46■■□□□ 1.19
COMMD1Q8N668 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.45■■□□□ 1.19
COMMD1Q8N668 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC22.44■■□□□ 1.18
COMMD1Q8N668 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
COMMD1Q8N668 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
COMMD1Q8N668 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COMMD1Q8N668 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
COMMD1Q8N668 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
COMMD1Q8N668 AL031258.1-201ENST00000623562 325 ntBASIC22.42■■□□□ 1.18
COMMD1Q8N668 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
COMMD1Q8N668 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
COMMD1Q8N668 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
COMMD1Q8N668 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
COMMD1Q8N668 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
COMMD1Q8N668 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC22.4■■□□□ 1.18
COMMD1Q8N668 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.4■■□□□ 1.18
COMMD1Q8N668 ABCB10P1-201ENST00000614297 2181 ntBASIC22.4■■□□□ 1.18
COMMD1Q8N668 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COMMD1Q8N668 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
COMMD1Q8N668 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
COMMD1Q8N668 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
COMMD1Q8N668 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COMMD1Q8N668 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
COMMD1Q8N668 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC22.38■■□□□ 1.17
COMMD1Q8N668 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COMMD1Q8N668 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
COMMD1Q8N668 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC22.36■■□□□ 1.17
COMMD1Q8N668 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC22.36■■□□□ 1.17
COMMD1Q8N668 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.36■■□□□ 1.17
COMMD1Q8N668 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
COMMD1Q8N668 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
COMMD1Q8N668 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
COMMD1Q8N668 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.34■■□□□ 1.17
COMMD1Q8N668 EBPL-203ENST00000378270 579 ntTSL 2 BASIC22.34■■□□□ 1.17
COMMD1Q8N668 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
COMMD1Q8N668 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
COMMD1Q8N668 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COMMD1Q8N668 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC22.32■■□□□ 1.16
COMMD1Q8N668 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
COMMD1Q8N668 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COMMD1Q8N668 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
COMMD1Q8N668 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
COMMD1Q8N668 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COMMD1Q8N668 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
COMMD1Q8N668 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
COMMD1Q8N668 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms