Protein–RNA interactions for Protein: Q86T23

CROCCP2, Putative ciliary rootlet coiled-coil protein-like 1 protein, humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP2Q86T23 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CROCCP2Q86T23 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
CROCCP2Q86T23 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CROCCP2Q86T23 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CROCCP2Q86T23 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
CROCCP2Q86T23 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.33■■■□□ 2.13
CROCCP2Q86T23 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CROCCP2Q86T23 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CROCCP2Q86T23 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CROCCP2Q86T23 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CROCCP2Q86T23 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
CROCCP2Q86T23 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CROCCP2Q86T23 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.27■■■□□ 2.12
CROCCP2Q86T23 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
CROCCP2Q86T23 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.27■■■□□ 2.12
CROCCP2Q86T23 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CROCCP2Q86T23 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CROCCP2Q86T23 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CROCCP2Q86T23 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC28.21■■■□□ 2.11
CROCCP2Q86T23 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CROCCP2Q86T23 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CROCCP2Q86T23 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CROCCP2Q86T23 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CROCCP2Q86T23 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CROCCP2Q86T23 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CROCCP2Q86T23 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
CROCCP2Q86T23 ABCB10P1-201ENST00000614297 2181 ntBASIC28.17■■■□□ 2.1
CROCCP2Q86T23 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CROCCP2Q86T23 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
CROCCP2Q86T23 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
CROCCP2Q86T23 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CROCCP2Q86T23 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CROCCP2Q86T23 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.15■■■□□ 2.1
CROCCP2Q86T23 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC28.12■■■□□ 2.09
CROCCP2Q86T23 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CROCCP2Q86T23 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.11■■■□□ 2.09
CROCCP2Q86T23 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CROCCP2Q86T23 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
CROCCP2Q86T23 ABCB10P3-201ENST00000561950 2166 ntBASIC28.1■■■□□ 2.09
CROCCP2Q86T23 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CROCCP2Q86T23 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CROCCP2Q86T23 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.07■■■□□ 2.08
CROCCP2Q86T23 AC120057.4-201ENST00000624722 1615 ntBASIC28.07■■■□□ 2.08
CROCCP2Q86T23 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CROCCP2Q86T23 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC28.04■■■□□ 2.08
CROCCP2Q86T23 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC28.03■■■□□ 2.08
CROCCP2Q86T23 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
CROCCP2Q86T23 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CROCCP2Q86T23 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CROCCP2Q86T23 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.02■■■□□ 2.08
CROCCP2Q86T23 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
CROCCP2Q86T23 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
CROCCP2Q86T23 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
CROCCP2Q86T23 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
CROCCP2Q86T23 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CROCCP2Q86T23 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
CROCCP2Q86T23 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC27.96■■■□□ 2.07
CROCCP2Q86T23 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CROCCP2Q86T23 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CROCCP2Q86T23 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
CROCCP2Q86T23 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
CROCCP2Q86T23 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
CROCCP2Q86T23 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CROCCP2Q86T23 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.06
CROCCP2Q86T23 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
CROCCP2Q86T23 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
CROCCP2Q86T23 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC27.94■■■□□ 2.06
CROCCP2Q86T23 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
CROCCP2Q86T23 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC27.93■■■□□ 2.06
CROCCP2Q86T23 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.92■■■□□ 2.06
CROCCP2Q86T23 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.91■■■□□ 2.06
CROCCP2Q86T23 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC27.9■■■□□ 2.06
CROCCP2Q86T23 AC015813.7-201ENST00000623294 581 ntBASIC27.9■■■□□ 2.06
CROCCP2Q86T23 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC27.9■■■□□ 2.06
CROCCP2Q86T23 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.89■■■□□ 2.06
CROCCP2Q86T23 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.88■■■□□ 2.05
CROCCP2Q86T23 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
CROCCP2Q86T23 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC27.88■■■□□ 2.05
CROCCP2Q86T23 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.87■■■□□ 2.05
CROCCP2Q86T23 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
CROCCP2Q86T23 AL161658.1-201ENST00000623641 1967 ntBASIC27.86■■■□□ 2.05
CROCCP2Q86T23 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
CROCCP2Q86T23 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.04
CROCCP2Q86T23 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CROCCP2Q86T23 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
CROCCP2Q86T23 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
CROCCP2Q86T23 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.81■■■□□ 2.04
CROCCP2Q86T23 SHF-206ENST00000560471 2499 ntTSL 5 BASIC27.81■■■□□ 2.04
CROCCP2Q86T23 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC27.8■■■□□ 2.04
CROCCP2Q86T23 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.8■■■□□ 2.04
CROCCP2Q86T23 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC27.8■■■□□ 2.04
CROCCP2Q86T23 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
CROCCP2Q86T23 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
CROCCP2Q86T23 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
CROCCP2Q86T23 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
CROCCP2Q86T23 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC27.76■■■□□ 2.03
CROCCP2Q86T23 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC27.73■■■□□ 2.03
CROCCP2Q86T23 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CROCCP2Q86T23 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
CROCCP2Q86T23 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms