Protein–RNA interactions for Protein: Q07953

SDO1, Ribosome maturation protein SDO1, yeastyeast

Known RBP Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDO1Q07953 YOR139CYOR139C 393 nt9.07□□□□□ -0.96
SDO1Q07953 YFL067WYFL067W 528 nt9.06□□□□□ -0.96
SDO1Q07953 YCL074WYCL074W 927 nt9.05□□□□□ -0.96
SDO1Q07953 GID7YCL039W 2238 nt9.05□□□□□ -0.96
SDO1Q07953 HSL7YBR133C 2484 nt9.04□□□□□ -0.96
SDO1Q07953 BNA2YJR078W 1362 nt9.03□□□□□ -0.96
SDO1Q07953 RDN25-1RDN25-1 3396 nt9.01□□□□□ -0.97
SDO1Q07953 RDN25-2RDN25-2 3396 nt9.01□□□□□ -0.97
SDO1Q07953 RNQ1YCL028W 1218 nt9.01□□□□□ -0.97
SDO1Q07953 YCL042WYCL042W 360 nt9.01□□□□□ -0.97
SDO1Q07953 DDR2YOL052C-A 186 nt8.99□□□□□ -0.97
SDO1Q07953 SOR2YDL246C 1074 nt8.98□□□□□ -0.97
SDO1Q07953 SOR1YJR159W 1074 nt8.98□□□□□ -0.97
SDO1Q07953 YAT1YAR035W 2064 nt8.97□□□□□ -0.97
SDO1Q07953 AGP1YCL025C 1902 nt8.97□□□□□ -0.97
SDO1Q07953 FTR1YER145C 1215 nt8.96□□□□□ -0.98
SDO1Q07953 TRM5YHR070W 1500 nt8.95□□□□□ -0.98
SDO1Q07953 NDI1YML120C 1542 nt8.95□□□□□ -0.98
SDO1Q07953 BSP1YPR171W 1731 nt8.95□□□□□ -0.98
SDO1Q07953 IMP2'YIL154C 1041 nt8.95□□□□□ -0.98
SDO1Q07953 GAL1YBR020W 1587 nt8.93□□□□□ -0.98
SDO1Q07953 YDL086C-AYDL086C-A 435 nt8.92□□□□□ -0.98
SDO1Q07953 YDR433WYDR433W 441 nt8.91□□□□□ -0.98
SDO1Q07953 MXR2YCL033C 507 nt8.91□□□□□ -0.98
SDO1Q07953 NPP1YCR026C 2229 nt8.9□□□□□ -0.98
SDO1Q07953 ESBP6YNL125C 2022 nt8.89□□□□□ -0.99
SDO1Q07953 FMP45YDL222C 930 nt8.89□□□□□ -0.99
SDO1Q07953 HHO1YPL127C 777 nt8.89□□□□□ -0.99
SDO1Q07953 MIC12YBR262C 321 nt8.89□□□□□ -0.99
SDO1Q07953 ANP1YEL036C 1503 nt8.87□□□□□ -0.99
SDO1Q07953 YPR011CYPR011C 981 nt8.86□□□□□ -0.99
SDO1Q07953 SFP1YLR403W 2052 nt8.85□□□□□ -0.99
SDO1Q07953 RFC1YOR217W 2586 nt8.84□□□□□ -0.99
SDO1Q07953 FRD1YEL047C 1413 nt8.84□□□□□ -0.99
SDO1Q07953 PUS2YGL063W 1113 nt8.84□□□□□ -0.99
SDO1Q07953 HEL2YDR266C 1920 nt8.84□□□□□ -1
SDO1Q07953 SPT20YOL148C 1815 nt8.83□□□□□ -1
SDO1Q07953 ERV46YAL042W 1248 nt8.82□□□□□ -1
SDO1Q07953 DIC1YLR348C 897 nt8.82□□□□□ -1
SDO1Q07953 RDN18-1RDN18-1 1800 nt8.82□□□□□ -1
SDO1Q07953 RDN18-2RDN18-2 1800 nt8.82□□□□□ -1
SDO1Q07953 STR3YGL184C 1398 nt8.79□□□□□ -1
SDO1Q07953 MET2YNL277W 1461 nt8.77□□□□□ -1
SDO1Q07953 YDR524C-BYDR524C-B 201 nt8.77□□□□□ -1.01
SDO1Q07953 YKR040CYKR040C 504 nt8.77□□□□□ -1.01
SDO1Q07953 LPX1YOR084W 1164 nt8.77□□□□□ -1.01
SDO1Q07953 FEN2YCR028C 1539 nt8.76□□□□□ -1.01
SDO1Q07953 AQY2YLL052C 450 nt8.76□□□□□ -1.01
SDO1Q07953 INA1YLR413W 2028 nt8.76□□□□□ -1.01
SDO1Q07953 XDJ1YLR090W 1380 nt8.75□□□□□ -1.01
SDO1Q07953 tM(CAU)CtM(CAU)C 72 nt8.75□□□□□ -1.01
SDO1Q07953 IMT4tM(CAU)E 72 nt8.75□□□□□ -1.01
SDO1Q07953 IMT3tM(CAU)J3 72 nt8.75□□□□□ -1.01
SDO1Q07953 IMT1tM(CAU)O1 72 nt8.75□□□□□ -1.01
SDO1Q07953 IMT2tM(CAU)P 72 nt8.75□□□□□ -1.01
SDO1Q07953 AQY1YPR192W 918 nt8.75□□□□□ -1.01
SDO1Q07953 STB1YNL309W 1263 nt8.74□□□□□ -1.01
SDO1Q07953 ILV2YMR108W 2064 nt8.73□□□□□ -1.01
SDO1Q07953 RTN2YDL204W 1182 nt8.73□□□□□ -1.01
SDO1Q07953 YGR201CYGR201C 678 nt8.73□□□□□ -1.01
SDO1Q07953 UBX6YJL048C 1191 nt8.73□□□□□ -1.01
SDO1Q07953 RIM8YGL045W 1629 nt8.72□□□□□ -1.01
SDO1Q07953 GDH3YAL062W 1374 nt8.72□□□□□ -1.01
SDO1Q07953 RPC82YPR190C 1965 nt8.72□□□□□ -1.01
SDO1Q07953 YIR016WYIR016W 798 nt8.7□□□□□ -1.02
SDO1Q07953 DUT1YBR252W 444 nt8.7□□□□□ -1.02
SDO1Q07953 GPI16YHR188C 1833 nt8.7□□□□□ -1.02
SDO1Q07953 SPC25YER018C 666 nt8.69□□□□□ -1.02
SDO1Q07953 DTR1YBR180W 1719 nt8.67□□□□□ -1.02
SDO1Q07953 GOR1YNL274C 1053 nt8.64□□□□□ -1.03
SDO1Q07953 VPS60YDR486C 690 nt8.63□□□□□ -1.03
SDO1Q07953 HMG2YLR450W 3138 nt8.63□□□□□ -1.03
SDO1Q07953 AVT6YER119C 1347 nt8.62□□□□□ -1.03
SDO1Q07953 HIF1YLL022C 1158 nt8.61□□□□□ -1.03
SDO1Q07953 GTB1YDR221W 2109 nt8.6□□□□□ -1.03
SDO1Q07953 MUP1YGR055W 1725 nt8.59□□□□□ -1.03
SDO1Q07953 YGL114WYGL114W 2178 nt8.58□□□□□ -1.04
SDO1Q07953 CCT4YDL143W 1587 nt8.57□□□□□ -1.04
SDO1Q07953 ALD4YOR374W 1560 nt8.57□□□□□ -1.04
SDO1Q07953 SWC5YBR231C 912 nt8.57□□□□□ -1.04
SDO1Q07953 ALG3YBL082C 1377 nt8.57□□□□□ -1.04
SDO1Q07953 YLR179CYLR179C 606 nt8.56□□□□□ -1.04
SDO1Q07953 TIM23YNR017W 669 nt8.54□□□□□ -1.04
SDO1Q07953 TPO4YOR273C 1980 nt8.53□□□□□ -1.04
SDO1Q07953 PRM5YIL117C 957 nt8.53□□□□□ -1.04
SDO1Q07953 PLB1YMR008C 1995 nt8.51□□□□□ -1.05
SDO1Q07953 PTH1YHR189W 573 nt8.5□□□□□ -1.05
SDO1Q07953 MAE1YKL029C 2010 nt8.49□□□□□ -1.05
SDO1Q07953 HEM14YER014W 1620 nt8.48□□□□□ -1.05
SDO1Q07953 YLR235CYLR235C 399 nt8.48□□□□□ -1.05
SDO1Q07953 AHT1YHR093W 549 nt8.47□□□□□ -1.05
SDO1Q07953 TOK1YJL093C 2076 nt8.46□□□□□ -1.05
SDO1Q07953 HOL1YNR055C 1761 nt8.45□□□□□ -1.06
SDO1Q07953 ZRT3YKL175W 1512 nt8.44□□□□□ -1.06
SDO1Q07953 UGA4YDL210W 1716 nt8.43□□□□□ -1.06
SDO1Q07953 SPP1YPL138C 1062 nt8.42□□□□□ -1.06
SDO1Q07953 GAL2YLR081W 1725 nt8.42□□□□□ -1.06
SDO1Q07953 URA8YJR103W 1737 nt8.41□□□□□ -1.06
SDO1Q07953 YNL024CYNL024C 741 nt8.39□□□□□ -1.07
SDO1Q07953 ARP6YLR085C 1317 nt8.38□□□□□ -1.07
Retrieved 100 of 7,029 protein–RNA pairs in 11.1 ms